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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180496279
OCAD01000496
117741
Bacteroidota
TAG
Leu
>WENV180496135
OCAD01000137
398829
Bacteroidota
CCT
Arg
>WENV180496187
OCAD01000215
175838
Bacteroidota
GTT
Asn
>WENV180496198
OCAD01000244
175838
Bacteroidota
GTT
Asn
>WENV180496703
OCAD01029512
175904
Bacteroidota
CGG
Pro
>WENV180495998
OCAD01000014
289031
Bacteroidota
CAT
Met
>WENV180496041
OCAD01000044
280557
Bacteroidota
CAT
Met
>WENV180496031
OCAD01000033
280557
Bacteroidota
CAT
Met
>WENV180496055
OCAD01000061
20206
Bacteroidota
GGA
Ser
>WENV180496049
OCAD01000053
483416
Bacteroidota
CTG
Gln
>WENV180496459
OCAD01002412
201819
Bacteroidota
CAT
Met
>WENV180496363
OCAD01000945
56493
Bacteroidota
TGA
Ser
>WENV180496189
OCAD01000234
56493
Bacteroidota
TGA
Ser
>WENV180496008
OCAD01000022
56493
Bacteroidota
TGA
Ser
>WENV180496137
OCAD01000142
175903
Bacteroidota
GTG
His
>WENV180496173
OCAD01000195
351598
Bacteroidota
CGG
Pro
>WENV180496069
OCAD01000069
351598
Bacteroidota
CGG
Pro
>WENV180496061
OCAD01000064
351598
Bacteroidota
CGG
Pro
>WENV180496036
OCAD01000039
351598
Bacteroidota
CGG
Pro
>WENV180496185
OCAD01000215
398872
Bacteroidota
GGT
Thr
>WENV180496168
OCAD01000182
398872
Bacteroidota
GGT
Thr
>WENV180496211
OCAD01000267
405877
Bacteroidota
GGT
Thr
>WENV180496209
OCAD01000266
29791
Bacteroidota
GCT
Ser
>WENV180496034
OCAD01000037
21127
Bacteroidota
GGA
Ser
>WENV180496272
OCAD01000469
56072
Bacteroidota
TAA
Leu
>WENV180496232
OCAD01000327
56072
Bacteroidota
TAA
Leu
>WENV180496121
OCAD01000121
175902
Bacteroidota
GGC
Ala
>WENV180496210
OCAD01000266
398860
Bacteroidota
CTC
Glu
>WENV180496413
OCAD01001657
480404
Bacteroidota
TTG
Gln
>WENV180496007
OCAD01000021
280451
Bacteroidota
CGT
Thr
>WENV180496184
OCAD01000215
99847
Bacteroidota
GTA
Tyr
>WENV180496047
OCAD01000050
99847
Bacteroidota
GTA
Tyr
>WENV180495971
OCAD01000002
99847
Bacteroidota
GTA
Tyr
>WENV180496600
OCAD01010389
399200
Bacteroidota
CAT
Met
>WENV180495993
OCAD01000014
186874
Bacteroidota
CAT
Met
>WENV180496199
OCAD01000245
488746
Bacteroidota
CTG
Gln
>WENV180496310
OCAD01000658
399026
Bacteroidota
CCT
Arg
>WENV180496242
OCAD01000365
175844
Bacteroidota
GGC
Ala
>WENV180496092
OCAD01000088
175844
Bacteroidota
GGC
Ala
>WENV180496485
OCAD01002809
280532
Bacteroidota
>WENV180496495
OCAD01002917
229246
Bacteroidota
GGC
Ala
>WENV180496178
OCAD01000206
480318
Bacteroidota
CTG
Gln
>WENV180496174
OCAD01000198
158068
Bacteroidota
GGG
Pro
>WENV180496233
OCAD01000328
398828
Bacteroidota
CCG
Arg
>WENV180496284
OCAD01000511
140771
Bacteroidota
>WENV180496281
OCAD01000511
140771
Bacteroidota
>WENV180496535
OCAD01004382
176192
Bacteroidota
TCT
Arg
>WENV180495986
OCAD01000010
176192
Bacteroidota
TCT
Arg
>WENV180496544
OCAD01004669
69204
Bacteroidota
TGA
Ser
>WENV180496411
OCAD01001566
69204
Bacteroidota
TGA
Ser
>WENV180496009
OCAD01000022
69204
Bacteroidota
TGA
Ser
>WENV180496305
OCAD01000639
280446
Bacteroidota
TTT
Lys
>WENV180496131
OCAD01000133
280446
Bacteroidota
TTT
Lys
>WENV180496107
OCAD01000102
280446
Bacteroidota
TTT
Lys
>WENV180496046
OCAD01000050
280446
Bacteroidota
TTT
Lys
>WENV180495985
OCAD01000009
280446
Bacteroidota
TTT
Lys
>WENV180496395
OCAD01001432
484496
Bacteroidota
TTG
Gln
>WENV180496037
OCAD01000040
484496
Bacteroidota
TTG
Gln
>WENV180496024
OCAD01000029
484496
Bacteroidota
TTG
Gln
>WENV180495970
OCAD01000001
484496
Bacteroidota
TTG
Gln
>WENV180496141
OCAD01000149
27502
Bacteroidota
GGA
Ser
>WENV180496006
OCAD01000018
27502
Bacteroidota
GGA
Ser
>WENV180495978
OCAD01000004
27502
Bacteroidota
GGA
Ser
>WENV180496736
OCAD01036416
285750
Bacteroidota
CCC
Gly
>WENV180496695
OCAD01027064
117804
Bacteroidota
TAG
Leu
>WENV180496204
OCAD01000256
365112
Bacteroidota
TTT
Lys
>WENV180496013
OCAD01000024
365112
Bacteroidota
TTT
Lys
>WENV180495982
OCAD01000006
365112
Bacteroidota
TTT
Lys
>WENV180496079
OCAD01000078
398836
Bacteroidota
GCA
Cys
>WENV180496074
OCAD01000076
398836
Bacteroidota
GCA
Cys
>WENV180496021
OCAD01000028
398836
Bacteroidota
GCA
Cys
>WENV180496500
OCAD01003013
170323
Bacteroidota
GGG
Pro
>WENV180496179
OCAD01000206
170323
Bacteroidota
GGG
Pro
>WENV180496149
OCAD01000154
170323
Bacteroidota
GGG
Pro
>WENV180495988
OCAD01000011
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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