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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180503969
OCAN01000227
117741
Bacteroidota
TAG
Leu
>WENV180504738
OCAN01058120
398829
Bacteroidota
CCT
Arg
>WENV180504744
OCAN01058329
175838
Bacteroidota
GTT
Asn
>WENV180504187
OCAN01000768
73057
Bacteroidota
GAG
Leu
>WENV180504420
OCAN01002590
289031
Bacteroidota
CAT
Met
>WENV180504018
OCAN01000314
280557
Bacteroidota
CAT
Met
>WENV180503981
OCAN01000244
280557
Bacteroidota
CAT
Met
>WENV180503744
OCAN01000030
20206
Bacteroidota
GGA
Ser
>WENV180504299
OCAN01001382
483416
Bacteroidota
CTG
Gln
>WENV180503780
OCAN01000053
201819
Bacteroidota
CAT
Met
>WENV180504739
OCAN01058159
56493
Bacteroidota
TGA
Ser
>WENV180504157
OCAN01000645
56493
Bacteroidota
TGA
Ser
>WENV180503980
OCAN01000243
56493
Bacteroidota
TGA
Ser
>WENV180504518
OCAN01004743
175906
Bacteroidota
GTG
His
>WENV180503848
OCAN01000090
175903
Bacteroidota
GTG
His
>WENV180503845
OCAN01000082
291612
Bacteroidota
>WENV180504161
OCAN01000646
291612
Bacteroidota
>WENV180504522
OCAN01005117
118089
Bacteroidota
TAG
Leu
>WENV180504737
OCAN01057618
398872
Bacteroidota
GGT
Thr
>WENV180504000
OCAN01000283
398872
Bacteroidota
GGT
Thr
>WENV180504595
OCAN01010910
280530
Bacteroidota
CCA
Trp
>WENV180503943
OCAN01000182
175936
Bacteroidota
CAT
Met
>WENV180503772
OCAN01000048
203954
Bacteroidota
GTC
Asp
>WENV180504508
OCAN01004463
178907
Bacteroidota
TCT
Arg
>WENV180504277
OCAN01001139
405877
Bacteroidota
GGT
Thr
>WENV180504599
OCAN01011727
20449
Bacteroidota
GGA
Ser
>WENV180504453
OCAN01003107
21127
Bacteroidota
GGA
Ser
>WENV180504180
OCAN01000733
56072
Bacteroidota
TAA
Leu
>WENV180504442
OCAN01002944
57807
Bacteroidota
TGA
Ser
>WENV180504222
OCAN01000923
57807
Bacteroidota
TGA
Ser
>WENV180504219
OCAN01000912
57807
Bacteroidota
TGA
Ser
>WENV180503939
OCAN01000177
57807
Bacteroidota
TGA
Ser
>WENV180503809
OCAN01000065
57807
Bacteroidota
TGA
Ser
>WENV180503808
OCAN01000065
57807
Bacteroidota
TGA
Ser
>WENV180503894
OCAN01000146
175902
Bacteroidota
GGC
Ala
>WENV180503829
OCAN01000073
398860
Bacteroidota
CTC
Glu
>WENV180503779
OCAN01000052
398860
Bacteroidota
CTC
Glu
>WENV180503732
OCAN01000022
398860
Bacteroidota
CTC
Glu
>WENV180503776
OCAN01000050
480404
Bacteroidota
TTG
Gln
>WENV180504722
OCAN01051620
480404
Bacteroidota
TTG
Gln
>WENV180504676
OCAN01029233
280451
Bacteroidota
CGT
Thr
>WENV180504296
OCAN01001352
99847
Bacteroidota
GTA
Tyr
>WENV180504285
OCAN01001274
99847
Bacteroidota
GTA
Tyr
>WENV180504036
OCAN01000363
99847
Bacteroidota
GTA
Tyr
>WENV180503733
OCAN01000023
99847
Bacteroidota
GTA
Tyr
>WENV180503680
OCAN01000010
99847
Bacteroidota
GTA
Tyr
>WENV180503666
OCAN01000004
99847
Bacteroidota
GTA
Tyr
>WENV180504634
OCAN01017909
399200
Bacteroidota
CAT
Met
>WENV180504443
OCAN01002960
186874
Bacteroidota
CAT
Met
>WENV180503743
OCAN01000030
488746
Bacteroidota
CTG
Gln
>WENV180504626
OCAN01015891
280478
Bacteroidota
GCC
Gly
>WENV180504013
OCAN01000302
20766
Bacteroidota
GGA
Ser
>WENV180503971
OCAN01000231
20766
Bacteroidota
GGA
Ser
>WENV180503833
OCAN01000076
20766
Bacteroidota
GGA
Ser
>WENV180503954
OCAN01000194
186108
Bacteroidota
GTT
Asn
>WENV180503953
OCAN01000194
186108
Bacteroidota
GTT
Asn
>WENV180504131
OCAN01000541
175844
Bacteroidota
GGC
Ala
>WENV180503684
OCAN01000011
175844
Bacteroidota
GGC
Ala
>WENV180503903
OCAN01000150
280532
Bacteroidota
>WENV180503735
OCAN01000024
480318
Bacteroidota
CTG
Gln
>WENV180504517
OCAN01004736
158068
Bacteroidota
GGG
Pro
>WENV180504400
OCAN01002276
158068
Bacteroidota
GGG
Pro
>WENV180504280
OCAN01001192
158068
Bacteroidota
GGG
Pro
>WENV180503745
OCAN01000030
158068
Bacteroidota
GGG
Pro
>WENV180503734
OCAN01000024
158068
Bacteroidota
GGG
Pro
>WENV180504470
OCAN01003647
186142
Bacteroidota
GAT
Ile
>WENV180503748
OCAN01000033
398828
Bacteroidota
CCG
Arg
>WENV180504072
OCAN01000425
159415
Bacteroidota
TAC
Val
>WENV180504071
OCAN01000425
159415
Bacteroidota
TAC
Val
>WENV180504572
OCAN01008271
480325
Bacteroidota
CTG
Gln
>WENV180504274
OCAN01001118
140771
Bacteroidota
>WENV180504271
OCAN01001118
140771
Bacteroidota
>WENV180503917
OCAN01000157
176192
Bacteroidota
TCT
Arg
>WENV180503826
OCAN01000072
176192
Bacteroidota
TCT
Arg
>WENV180503673
OCAN01000007
176192
Bacteroidota
TCT
Arg
>WENV180504575
OCAN01008509
280446
Bacteroidota
TTT
Lys
>WENV180504363
OCAN01001848
280446
Bacteroidota
TTT
Lys
>WENV180504120
OCAN01000503
280446
Bacteroidota
TTT
Lys
>WENV180503800
OCAN01000058
295349
Bacteroidota
CCA
Trp
>WENV180504336
OCAN01001649
484496
Bacteroidota
TTG
Gln
>WENV180503667
OCAN01000005
484496
Bacteroidota
TTG
Gln
>WENV180504017
OCAN01000312
188555
Bacteroidota
CAT
Met
>WENV180503709
OCAN01000014
117804
Bacteroidota
TAG
Leu
>WENV180504471
OCAN01003647
186143
Bacteroidota
TGC
Ala
>WENV180504386
OCAN01002181
398836
Bacteroidota
GCA
Cys
>WENV180504259
OCAN01001053
398836
Bacteroidota
GCA
Cys
>WENV180504170
OCAN01000700
398836
Bacteroidota
GCA
Cys
>WENV180504099
OCAN01000474
398836
Bacteroidota
GCA
Cys
>WENV180503768
OCAN01000045
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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