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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180510385
OCGO01000033
404084
Gammaproteobacteria
CTG
Gln
>WENV180510396
OCGO01000065
401199
Gammaproteobacteria
TCC
Gly
>WENV180510368
OCGO01000019
285918
Gammaproteobacteria
GTG
His
>WENV180510338
OCGO01000002
185197
Gammaproteobacteria
GAC
Val
>WENV180510360
OCGO01000015
74049
Gammaproteobacteria
CAG
Leu
>WENV180510367
OCGO01000019
179440
Gammaproteobacteria
CCG
Arg
>WENV180510401
OCGO01000164
286016
Gammaproteobacteria
TTT
Lys
>WENV180510379
OCGO01000030
286016
Gammaproteobacteria
TTT
Lys
>WENV180510378
OCGO01000030
286016
Gammaproteobacteria
TTT
Lys
>WENV180510376
OCGO01000030
286016
Gammaproteobacteria
TTT
Lys
>WENV180510374
OCGO01000030
286016
Gammaproteobacteria
TTT
Lys
>WENV180510381
OCGO01000033
119263
Gammaproteobacteria
TAG
Leu
>WENV180510397
OCGO01000065
285826
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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