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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180534638
OCHM01029672
175883
Actinomycetota
GAT
Ile
>WENV180533798
OCHM01000143
280503
Actinomycetota
CCT
Arg
>WENV180534052
OCHM01000681
186055
Actinomycetota
ACG
Arg
>WENV180534372
OCHM01005057
398843
Actinomycetota
GTT
Asn
>WENV180534373
OCHM01005057
398843
Actinomycetota
GTT
Asn
>WENV180534097
OCHM01000867
298224
Actinomycetota
GGC
Ala
>WENV180534378
OCHM01005366
481719
Actinomycetota
GCA
Cys
>WENV180534620
OCHM01025732
291585
Actinomycetota
GCC
Gly
>WENV180534377
OCHM01005366
291585
Actinomycetota
GCC
Gly
>WENV180534379
OCHM01005366
291585
Actinomycetota
GCC
Gly
>WENV180534235
OCHM01001937
280536
Actinomycetota
CTT
Lys
>WENV180533906
OCHM01000280
175926
Actinomycetota
CAT
Met
>WENV180534013
OCHM01000603
483206
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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