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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180540905
OCHR01008780
172207
Bacteroidota
GGG
Pro
>WENV180540833
OCHR01000329
398829
Bacteroidota
CCT
Arg
>WENV180540957
OCHR01021640
289031
Bacteroidota
CAT
Met
>WENV180541606
OCHR01232461
280557
Bacteroidota
CAT
Met
>WENV180540839
OCHR01000629
20492
Bacteroidota
GGA
Ser
>WENV180540859
OCHR01003105
20206
Bacteroidota
GGA
Ser
>WENV180541114
OCHR01050955
398871
Bacteroidota
TTC
Glu
>WENV180540861
OCHR01003612
201819
Bacteroidota
CAT
Met
>WENV180540929
OCHR01014317
175906
Bacteroidota
GTG
His
>WENV180540858
OCHR01003033
175903
Bacteroidota
GTG
His
>WENV180541308
OCHR01093185
351598
Bacteroidota
CGG
Pro
>WENV180541214
OCHR01068286
398872
Bacteroidota
GGT
Thr
>WENV180540838
OCHR01000576
280530
Bacteroidota
CCA
Trp
>WENV180541588
OCHR01231402
203954
Bacteroidota
GTC
Asp
>WENV180540900
OCHR01007625
182267
Bacteroidota
GTT
Asn
>WENV180540865
OCHR01003738
20449
Bacteroidota
GGA
Ser
>WENV180541331
OCHR01101743
56072
Bacteroidota
TAA
Leu
>WENV180541238
OCHR01076014
56072
Bacteroidota
TAA
Leu
>WENV180540936
OCHR01017298
179697
Bacteroidota
TGT
Thr
>WENV180540875
OCHR01005447
280451
Bacteroidota
CGT
Thr
>WENV180541182
OCHR01060421
418894
Bacteroidota
TTC
Glu
>WENV180540896
OCHR01007114
99847
Bacteroidota
GTA
Tyr
>WENV180541567
OCHR01226240
488746
Bacteroidota
CTG
Gln
>WENV180540966
OCHR01025947
175844
Bacteroidota
GGC
Ala
>WENV180541566
OCHR01225072
73011
Bacteroidota
CAA
Leu
>WENV180540844
OCHR01001671
280515
Bacteroidota
CCA
Trp
>WENV180541520
OCHR01197579
186142
Bacteroidota
GAT
Ile
>WENV180541035
OCHR01036853
74084
Bacteroidota
CAG
Leu
>WENV180541593
OCHR01231577
480325
Bacteroidota
CTG
Gln
>WENV180541452
OCHR01151496
140771
Bacteroidota
>WENV180541150
OCHR01057054
140771
Bacteroidota
>WENV180541435
OCHR01141021
140771
Bacteroidota
>WENV180540847
OCHR01001796
69204
Bacteroidota
TGA
Ser
>WENV180541065
OCHR01044379
280446
Bacteroidota
TTT
Lys
>WENV180541568
OCHR01227007
484496
Bacteroidota
TTG
Gln
>WENV180540834
OCHR01000382
27502
Bacteroidota
GGA
Ser
>WENV180540923
OCHR01011827
186143
Bacteroidota
TGC
Ala
>WENV180540918
OCHR01010898
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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