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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180548991
OCIY01015827
404226
Bacteroidota
CCT
Arg
>WENV180548794
OCIY01000025
400161
Bacteroidota
GGT
Thr
>WENV180549074
OCIY01026336
289031
Bacteroidota
CAT
Met
>WENV180548863
OCIY01002392
280557
Bacteroidota
CAT
Met
>WENV180548869
OCIY01002995
20206
Bacteroidota
GGA
Ser
>WENV180549483
OCIY01122896
282712
Bacteroidota
TTT
Lys
>WENV180549227
OCIY01047710
398871
Bacteroidota
TTC
Glu
>WENV180549677
OCIY01243548
56493
Bacteroidota
TGA
Ser
>WENV180549662
OCIY01236289
175903
Bacteroidota
GTG
His
>WENV180549130
OCIY01033386
351598
Bacteroidota
CGG
Pro
>WENV180549029
OCIY01020326
351598
Bacteroidota
CGG
Pro
>WENV180549005
OCIY01017064
351598
Bacteroidota
CGG
Pro
>WENV180549326
OCIY01069444
398872
Bacteroidota
GGT
Thr
>WENV180549600
OCIY01191237
203954
Bacteroidota
GTC
Asp
>WENV180549051
OCIY01023618
29791
Bacteroidota
GCT
Ser
>WENV180549484
OCIY01124049
20449
Bacteroidota
GGA
Ser
>WENV180548795
OCIY01000025
312035
Bacteroidota
CCA
Trp
>WENV180549304
OCIY01063133
178133
Bacteroidota
GAT
Ile
>WENV180549682
OCIY01244585
242241
Bacteroidota
GTC
Asp
>WENV180548956
OCIY01009585
56072
Bacteroidota
TAA
Leu
>WENV180548989
OCIY01015259
56072
Bacteroidota
TAA
Leu
>WENV180549052
OCIY01023618
398860
Bacteroidota
CTC
Glu
>WENV180549006
OCIY01017295
280451
Bacteroidota
CGT
Thr
>WENV180549501
OCIY01132783
99847
Bacteroidota
GTA
Tyr
>WENV180549158
OCIY01037101
99847
Bacteroidota
GTA
Tyr
>WENV180549056
OCIY01025368
99847
Bacteroidota
GTA
Tyr
>WENV180548984
OCIY01014883
99847
Bacteroidota
GTA
Tyr
>WENV180548881
OCIY01003565
99847
Bacteroidota
GTA
Tyr
>WENV180548936
OCIY01007665
399200
Bacteroidota
CAT
Met
>WENV180548832
OCIY01001105
399200
Bacteroidota
CAT
Met
>WENV180548998
OCIY01016327
404109
Bacteroidota
CTC
Glu
>WENV180548997
OCIY01016327
404109
Bacteroidota
CTC
Glu
>WENV180548903
OCIY01005136
46648
Bacteroidota
TAA
Leu
>WENV180549456
OCIY01112897
488746
Bacteroidota
CTG
Gln
>WENV180549096
OCIY01029717
488746
Bacteroidota
CTG
Gln
>WENV180548877
OCIY01003096
280478
Bacteroidota
GCC
Gly
>WENV180548875
OCIY01003096
280478
Bacteroidota
GCC
Gly
>WENV180548866
OCIY01002926
20766
Bacteroidota
GGA
Ser
>WENV180549173
OCIY01039939
73011
Bacteroidota
CAA
Leu
>WENV180549690
OCIY01246587
158068
Bacteroidota
GGG
Pro
>WENV180549369
OCIY01081844
158068
Bacteroidota
GGG
Pro
>WENV180549613
OCIY01198338
74084
Bacteroidota
CAG
Leu
>WENV180548968
OCIY01010670
159415
Bacteroidota
TAC
Val
>WENV180548822
OCIY01000778
400088
Bacteroidota
GGT
Thr
>WENV180549376
OCIY01084270
280446
Bacteroidota
TTT
Lys
>WENV180549286
OCIY01060819
280446
Bacteroidota
TTT
Lys
>WENV180548954
OCIY01009454
484496
Bacteroidota
TTG
Gln
>WENV180548849
OCIY01001981
484496
Bacteroidota
TTG
Gln
>WENV180549489
OCIY01127256
186143
Bacteroidota
TGC
Ala
>WENV180549700
OCIY01335521
365112
Bacteroidota
TTT
Lys
>WENV180548862
OCIY01002388
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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