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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180555062
OCJO01063873
176499
Actinomycetota
CAT
Met
>WENV180555477
OCJO01163240
175883
Actinomycetota
GAT
Ile
>WENV180555553
OCJO01190065
447337
Actinomycetota
GAC
Val
>WENV180555248
OCJO01103303
280702
Actinomycetota
GGC
Ala
>WENV180555767
OCJO01298184
398843
Actinomycetota
GTT
Asn
>WENV180555460
OCJO01154395
241064
Actinomycetota
CTC
Glu
>WENV180555002
OCJO01051176
481719
Actinomycetota
GCA
Cys
>WENV180555003
OCJO01051176
291585
Actinomycetota
GCC
Gly
>WENV180555459
OCJO01154395
483206
Actinomycetota
CTG
Gln
>WENV180555415
OCJO01143808
480319
Actinomycetota
TTG
Gln
>WENV180555464
OCJO01157067
280489
Actinomycetota
CTC
Glu
>WENV180555465
OCJO01157067
398853
Actinomycetota
CTG
Gln
>WENV180555061
OCJO01063873
117903
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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