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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180556689
OCJT01000029
283336
Actinomycetota
GGT
Thr
>WENV180556649
OCJT01000015
178581
Actinomycetota
TAC
Val
>WENV180556657
OCJT01000017
400421
Actinomycetota
GAC
Val
>WENV180556720
OCJT01000067
100162
Actinomycetota
TGA
Ser
>WENV180556651
OCJT01000015
283331
Actinomycetota
CTC
Glu
>WENV180556690
OCJT01000029
399203
Actinomycetota
CAT
Met
>WENV180556643
OCJT01000013
283323
Actinomycetota
TGT
Thr
>WENV180556706
OCJT01000051
178580
Actinomycetota
GAA
Phe
>WENV180556700
OCJT01000045
481050
Actinomycetota
CCC
Gly
>WENV180556709
OCJT01000056
46790
Actinomycetota
GAG
Leu
>WENV180556705
OCJT01000051
178579
Actinomycetota
GTC
Asp
>WENV180556712
OCJT01000057
283329
Actinomycetota
GTG
His
>WENV180556621
OCJT01000006
283327
Actinomycetota
TGC
Ala
>WENV180556695
OCJT01000031
283335
Actinomycetota
CTT
Lys
>WENV180556749
OCJT01000163
100161
Actinomycetota
CAG
Leu
>WENV180556722
OCJT01000067
300986
Actinomycetota
ACG
Arg
>WENV180556723
OCJT01000067
56387
Actinomycetota
CGA
Ser
>WENV180556707
OCJT01000051
178582
Actinomycetota
TTT
Lys
>WENV180556650
OCJT01000015
400420
Actinomycetota
CTG
Gln
>WENV180556642
OCJT01000013
283322
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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