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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180560080
OCKE01001097
200563
Bacillota
TGG
Pro
>WENV180560047
OCKE01000143
362245
Bacillota
TAC
Val
>WENV180559915
OCKE01000004
238111
Bacillota
CAT
Met
>WENV180560059
OCKE01000280
20221
Bacillota
>WENV180560098
OCKE01002570
280644
Bacillota
CCA
Trp
>WENV180560053
OCKE01000150
298270
Bacillota
TAC
Val
>WENV180560062
OCKE01000354
298270
Bacillota
TAC
Val
>WENV180560058
OCKE01000208
13228
Bacillota
GGA
Ser
>WENV180560073
OCKE01001097
176014
Bacillota
TCT
Arg
>WENV180560050
OCKE01000143
176014
Bacillota
TCT
Arg
>WENV180560049
OCKE01000143
398916
Bacillota
>WENV180560067
OCKE01000494
480360
Bacillota
GCA
Cys
>WENV180560068
OCKE01000494
176087
Bacillota
ACG
Arg
>WENV180560066
OCKE01000487
56095
Bacillota
CAA
Leu
>WENV180559978
OCKE01000021
371336
Bacillota
GAA
Phe
>WENV180560048
OCKE01000143
195133
Bacillota
GTC
Asp
>WENV180560071
OCKE01001097
124757
Bacillota
GTA
Tyr
>WENV180560054
OCKE01000150
478081
Bacillota
TGT
Thr
>WENV180560063
OCKE01000354
478081
Bacillota
TGT
Thr
>WENV180560070
OCKE01001097
478081
Bacillota
TGT
Thr
>WENV180560069
OCKE01000494
280640
Bacillota
TAC
Val
>WENV180560081
OCKE01001097
176019
Bacillota
GTG
His
>WENV180560115
OCKE01005198
176019
Bacillota
GTG
His
>WENV180560076
OCKE01001097
52889
Bacillota
TGA
Ser
>WENV180560072
OCKE01001097
146968
Bacillota
TAG
Leu
>WENV180560113
OCKE01005181
176017
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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