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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180561480
OCKY01017776
179231
Actinomycetota
TAC
Val
>WENV180561465
OCKY01015691
175883
Actinomycetota
GAT
Ile
>WENV180561553
OCKY01071902
280498
Actinomycetota
GTT
Asn
>WENV180561481
OCKY01017785
140768
Actinomycetota
TAG
Leu
>WENV180561436
OCKY01009573
175837
Actinomycetota
ACG
Arg
>WENV180561477
OCKY01017555
241064
Actinomycetota
CTC
Glu
>WENV180561424
OCKY01006539
176638
Actinomycetota
GGG
Pro
>WENV180561507
OCKY01028457
280524
Actinomycetota
TGC
Ala
>WENV180561473
OCKY01016990
481719
Actinomycetota
GCA
Cys
>WENV180561472
OCKY01016990
291585
Actinomycetota
GCC
Gly
>WENV180561508
OCKY01028457
280523
Actinomycetota
GGC
Ala
>WENV180561567
OCKY01091028
280536
Actinomycetota
CTT
Lys
>WENV180561488
OCKY01019985
175872
Actinomycetota
GTC
Asp
>WENV180561405
OCKY01004740
20205
Actinomycetota
GCT
Ser
>WENV180561529
OCKY01047311
280450
Actinomycetota
TTT
Lys
>WENV180561476
OCKY01017555
483206
Actinomycetota
CTG
Gln
>WENV180561554
OCKY01074162
480319
Actinomycetota
TTG
Gln
>WENV180561504
OCKY01025914
280489
Actinomycetota
CTC
Glu
>WENV180561399
OCKY01004400
280499
Actinomycetota
CCT
Arg
>WENV180561537
OCKY01051595
104211
Actinomycetota
CAG
Leu
>WENV180561541
OCKY01053133
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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