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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180561807
OCKZ01008637
400161
Bacteroidota
GGT
Thr
>WENV180561838
OCKZ01015408
201819
Bacteroidota
CAT
Met
>WENV180561630
OCKZ01000211
118221
Bacteroidota
CAA
Leu
>WENV180561867
OCKZ01021276
56385
Bacteroidota
TGA
Ser
>WENV180561763
OCKZ01005043
312035
Bacteroidota
CCA
Trp
>WENV180561814
OCKZ01009870
242241
Bacteroidota
GTC
Asp
>WENV180561742
OCKZ01003776
242241
Bacteroidota
GTC
Asp
>WENV180561657
OCKZ01000666
175944
Bacteroidota
CAT
Met
>WENV180561741
OCKZ01003707
404109
Bacteroidota
CTC
Glu
>WENV180561674
OCKZ01001166
46648
Bacteroidota
TAA
Leu
>WENV180561688
OCKZ01001835
488746
Bacteroidota
CTG
Gln
>WENV180561803
OCKZ01008602
187400
Bacteroidota
GTT
Asn
>WENV180561856
OCKZ01018496
191205
Bacteroidota
TGG
Pro
>WENV180561940
OCKZ01070129
74084
Bacteroidota
CAG
Leu
>WENV180561659
OCKZ01000682
481328
Bacteroidota
TTG
Gln
>WENV180561703
OCKZ01002163
491385
Bacteroidota
TTG
Gln
>WENV180561936
OCKZ01064904
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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