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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180562965
OCLC01000155
172207
Bacteroidota
GGG
Pro
>WENV180563006
OCLC01000332
172207
Bacteroidota
GGG
Pro
>WENV180563022
OCLC01000467
117741
Bacteroidota
TAG
Leu
>WENV180562854
OCLC01000015
398829
Bacteroidota
CCT
Arg
>WENV180563057
OCLC01000751
175838
Bacteroidota
GTT
Asn
>WENV180563413
OCLC01026287
289031
Bacteroidota
CAT
Met
>WENV180563045
OCLC01000567
280557
Bacteroidota
CAT
Met
>WENV180563044
OCLC01000567
280557
Bacteroidota
CAT
Met
>WENV180562990
OCLC01000250
20206
Bacteroidota
GGA
Ser
>WENV180563296
OCLC01011018
398871
Bacteroidota
TTC
Glu
>WENV180563065
OCLC01000833
56493
Bacteroidota
TGA
Ser
>WENV180562939
OCLC01000087
56493
Bacteroidota
TGA
Ser
>WENV180562863
OCLC01000021
56493
Bacteroidota
TGA
Ser
>WENV180562980
OCLC01000186
351598
Bacteroidota
CGG
Pro
>WENV180562889
OCLC01000031
351598
Bacteroidota
CGG
Pro
>WENV180562947
OCLC01000114
182267
Bacteroidota
GTT
Asn
>WENV180562946
OCLC01000114
182267
Bacteroidota
GTT
Asn
>WENV180563537
OCLC01072842
21127
Bacteroidota
GGA
Ser
>WENV180562888
OCLC01000031
56072
Bacteroidota
TAA
Leu
>WENV180562856
OCLC01000015
56072
Bacteroidota
TAA
Leu
>WENV180562935
OCLC01000081
175902
Bacteroidota
GGC
Ala
>WENV180563429
OCLC01029413
280451
Bacteroidota
CGT
Thr
>WENV180563409
OCLC01025715
418894
Bacteroidota
TTC
Glu
>WENV180563553
OCLC01083517
99847
Bacteroidota
GTA
Tyr
>WENV180563109
OCLC01001711
399200
Bacteroidota
CAT
Met
>WENV180562966
OCLC01000155
488746
Bacteroidota
CTG
Gln
>WENV180563458
OCLC01037613
280478
Bacteroidota
GCC
Gly
>WENV180563519
OCLC01059862
186142
Bacteroidota
GAT
Ile
>WENV180562940
OCLC01000101
398828
Bacteroidota
CCG
Arg
>WENV180563216
OCLC01004916
74084
Bacteroidota
CAG
Leu
>WENV180563438
OCLC01033158
480325
Bacteroidota
CTG
Gln
>WENV180563599
OCLC01129488
140771
Bacteroidota
>WENV180563596
OCLC01129388
140771
Bacteroidota
>WENV180562928
OCLC01000079
140771
Bacteroidota
>WENV180563054
OCLC01000706
69204
Bacteroidota
TGA
Ser
>WENV180562948
OCLC01000116
69204
Bacteroidota
TGA
Ser
>WENV180563002
OCLC01000325
280446
Bacteroidota
TTT
Lys
>WENV180563018
OCLC01000413
484496
Bacteroidota
TTG
Gln
>WENV180562957
OCLC01000139
27502
Bacteroidota
GGA
Ser
>WENV180563080
OCLC01000980
285750
Bacteroidota
CCC
Gly
>WENV180563520
OCLC01059862
186143
Bacteroidota
TGC
Ala
>WENV180562963
OCLC01000152
365112
Bacteroidota
TTT
Lys
>WENV180562942
OCLC01000103
365112
Bacteroidota
TTT
Lys
>WENV180563092
OCLC01001274
398836
Bacteroidota
GCA
Cys
>WENV180562885
OCLC01000028
398836
Bacteroidota
GCA
Cys
>WENV180562884
OCLC01000028
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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