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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180564179
OCLD01032361
280428
Bacillota
GAA
Phe
>WENV180563810
OCLD01002436
179917
Bacillota
CAT
Met
>WENV180564069
OCLD01018133
175842
Bacillota
CAC
Val
>WENV180564032
OCLD01014929
194260
Bacillota
GAT
Ile
>WENV180563968
OCLD01010538
295166
Bacillota
TGC
Ala
>WENV180564104
OCLD01020985
280447
Bacillota
GAC
Val
>WENV180564023
OCLD01014291
5692
Bacillota
GCT
Ser
>WENV180564097
OCLD01020600
186123
Bacillota
GTC
Asp
>WENV180564112
OCLD01021614
175825
Bacillota
GAT
Ile
>WENV180564094
OCLD01020460
175825
Bacillota
GAT
Ile
>WENV180564072
OCLD01018440
175825
Bacillota
GAT
Ile
>WENV180564041
OCLD01015640
175825
Bacillota
GAT
Ile
>WENV180564162
OCLD01028847
73009
Bacillota
CAG
Leu
>WENV180564121
OCLD01023203
407840
Bacillota
TTC
Glu
>WENV180564350
OCLD01100929
291581
Bacillota
CGG
Pro
>WENV180564305
OCLD01074415
175859
Bacillota
TCT
Arg
>WENV180564282
OCLD01060646
280436
Bacillota
TGC
Ala
>WENV180564050
OCLD01016205
290325
Bacillota
GCC
Gly
>WENV180564329
OCLD01085761
175831
Bacillota
ACG
Arg
>WENV180563664
OCLD01000243
294020
Bacillota
TAC
Val
>WENV180564248
OCLD01048352
322848
Bacillota
CTT
Lys
>WENV180564358
OCLD01107803
398854
Bacillota
CTC
Glu
>WENV180564322
OCLD01083221
291576
Bacillota
CCC
Gly
>WENV180564368
OCLD01115486
480324
Bacillota
TTG
Gln
>WENV180564192
OCLD01035504
179755
Bacillota
CCG
Arg
>WENV180564227
OCLD01042966
201856
Bacillota
GAT
Ile
>WENV180564089
OCLD01020118
289123
Bacillota
GGT
Thr
>WENV180563651
OCLD01000153
406186
Bacillota
CTC
Glu
>WENV180564336
OCLD01089097
398833
Bacillota
TGT
Thr
>WENV180564178
OCLD01032361
175849
Bacillota
GTC
Asp
>WENV180564098
OCLD01020600
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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