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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180570731
OCLS01000462
117741
Bacteroidota
TAG
Leu
>WENV180570362
OCLS01000057
398829
Bacteroidota
CCT
Arg
>WENV180570721
OCLS01000444
175838
Bacteroidota
GTT
Asn
>WENV180570722
OCLS01000444
175838
Bacteroidota
GTT
Asn
>WENV180570549
OCLS01000240
280557
Bacteroidota
CAT
Met
>WENV180570460
OCLS01000133
20206
Bacteroidota
GGA
Ser
>WENV180570378
OCLS01000076
201819
Bacteroidota
CAT
Met
>WENV180570377
OCLS01000076
201819
Bacteroidota
CAT
Met
>WENV180570340
OCLS01000051
56493
Bacteroidota
TGA
Ser
>WENV180570341
OCLS01000051
175903
Bacteroidota
GTG
His
>WENV180570315
OCLS01000038
351598
Bacteroidota
CGG
Pro
>WENV180570666
OCLS01000369
56072
Bacteroidota
TAA
Leu
>WENV180570262
OCLS01000025
57807
Bacteroidota
TGA
Ser
>WENV180570326
OCLS01000045
175902
Bacteroidota
GGC
Ala
>WENV180570335
OCLS01000047
280451
Bacteroidota
CGT
Thr
>WENV180570724
OCLS01000444
99847
Bacteroidota
GTA
Tyr
>WENV180570263
OCLS01000025
99847
Bacteroidota
GTA
Tyr
>WENV180570459
OCLS01000133
488746
Bacteroidota
CTG
Gln
>WENV180570461
OCLS01000133
158068
Bacteroidota
GGG
Pro
>WENV180570334
OCLS01000047
398828
Bacteroidota
CCG
Arg
>WENV180570658
OCLS01000355
140771
Bacteroidota
>WENV180570655
OCLS01000355
140771
Bacteroidota
>WENV180570417
OCLS01000096
280446
Bacteroidota
TTT
Lys
>WENV180570399
OCLS01000083
280446
Bacteroidota
TTT
Lys
>WENV180570661
OCLS01000358
484496
Bacteroidota
TTG
Gln
>WENV180570815
OCLS01000657
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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