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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180580224
OCME01003247
343590
Bacillota
GCC
Gly
>WENV180580225
OCME01003247
343590
Bacillota
GCC
Gly
>WENV180580534
OCME01048463
280500
Bacillota
TGC
Ala
>WENV180580708
OCME01138736
280500
Bacillota
TGC
Ala
>WENV180580807
OCME01198558
280500
Bacillota
TGC
Ala
>WENV180580129
OCME01001034
349107
Bacillota
GCC
Gly
>WENV180580184
OCME01002144
349107
Bacillota
GCC
Gly
>WENV180580805
OCME01198505
349107
Bacillota
GCC
Gly
>WENV180580600
OCME01073487
405363
Bacillota
GCA
Cys
>WENV180580388
OCME01014968
290391
Bacillota
TAC
Val
>WENV180580715
OCME01144068
280428
Bacillota
GAA
Phe
>WENV180580661
OCME01117724
280428
Bacillota
GAA
Phe
>WENV180580555
OCME01054756
280428
Bacillota
GAA
Phe
>WENV180580509
OCME01041245
280428
Bacillota
GAA
Phe
>WENV180580128
OCME01001034
280428
Bacillota
GAA
Phe
>WENV180580268
OCME01005435
229015
Bacillota
GTG
His
>WENV180580608
OCME01082964
179917
Bacillota
CAT
Met
>WENV180580218
OCME01002990
179917
Bacillota
CAT
Met
>WENV180580779
OCME01195319
179917
Bacillota
CAT
Met
>WENV180580185
OCME01002144
280466
Bacillota
TAC
Val
>WENV180580024
OCME01000011
280492
Bacillota
CTT
Lys
>WENV180580018
OCME01000010
280492
Bacillota
CTT
Lys
>WENV180580107
OCME01000607
175842
Bacillota
CAC
Val
>WENV180580537
OCME01050030
348419
Bacillota
GTT
Asn
>WENV180580046
OCME01000073
348419
Bacillota
GTT
Asn
>WENV180580069
OCME01000151
184497
Bacillota
GGG
Pro
>WENV180580484
OCME01036000
179176
Bacillota
ACG
Arg
>WENV180580026
OCME01000020
73664
Bacillota
CAG
Leu
>WENV180580489
OCME01037097
280447
Bacillota
GAC
Val
>WENV180580395
OCME01015382
5692
Bacillota
GCT
Ser
>WENV180580381
OCME01014209
284723
Bacillota
TAC
Val
>WENV180580798
OCME01197325
73009
Bacillota
CAG
Leu
>WENV180580403
OCME01016566
73009
Bacillota
CAG
Leu
>WENV180580305
OCME01007470
481217
Bacillota
GCA
Cys
>WENV180580277
OCME01005695
189473
Bacillota
GAT
Ile
>WENV180580350
OCME01011609
291581
Bacillota
CGG
Pro
>WENV180580468
OCME01031108
175859
Bacillota
TCT
Arg
>WENV180580794
OCME01196035
175847
Bacillota
GTC
Asp
>WENV180580457
OCME01028708
175847
Bacillota
GTC
Asp
>WENV180580443
OCME01026493
175831
Bacillota
ACG
Arg
>WENV180580267
OCME01005435
179810
Bacillota
TCT
Arg
>WENV180580056
OCME01000112
179810
Bacillota
TCT
Arg
>WENV180580796
OCME01196224
284627
Bacillota
GAA
Phe
>WENV180580134
OCME01001109
284627
Bacillota
GAA
Phe
>WENV180580066
OCME01000126
284627
Bacillota
GAA
Phe
>WENV180580533
OCME01048463
175916
Bacillota
GAT
Ile
>WENV180580392
OCME01015256
480322
Bacillota
CTG
Gln
>WENV180580349
OCME01011609
480322
Bacillota
CTG
Gln
>WENV180580103
OCME01000584
401685
Bacillota
TTG
Gln
>WENV180580770
OCME01193390
175868
Bacillota
GTT
Asn
>WENV180580622
OCME01088530
322848
Bacillota
CTT
Lys
>WENV180580416
OCME01020214
322848
Bacillota
CTT
Lys
>WENV180580769
OCME01193390
398854
Bacillota
CTC
Glu
>WENV180580621
OCME01088530
398854
Bacillota
CTC
Glu
>WENV180580415
OCME01020214
398854
Bacillota
CTC
Glu
>WENV180580485
OCME01036258
291576
Bacillota
CCC
Gly
>WENV180580516
OCME01043024
480324
Bacillota
TTG
Gln
>WENV180580290
OCME01006577
497729
Bacillota
CCA
Trp
>WENV180580280
OCME01005992
497729
Bacillota
CCA
Trp
>WENV180580118
OCME01000922
180688
Bacillota
GTC
Asp
>WENV180580037
OCME01000036
175899
Bacillota
GTC
Asp
>WENV180580030
OCME01000034
175899
Bacillota
GTC
Asp
>WENV180580698
OCME01130770
303718
Bacillota
TGT
Thr
>WENV180580007
OCME01000003
56079
Bacillota
AAG
Leu
>WENV180580711
OCME01142613
323864
Bacillota
TGC
Ala
>WENV180580538
OCME01050030
398857
Bacillota
TTC
Glu
>WENV180580047
OCME01000073
398857
Bacillota
TTC
Glu
>WENV180580033
OCME01000034
117745
Bacillota
GTA
Tyr
>WENV180580017
OCME01000009
117745
Bacillota
GTA
Tyr
>WENV180580783
OCME01195472
280444
Bacillota
GGT
Thr
>WENV180580334
OCME01009818
280444
Bacillota
GGT
Thr
>WENV180580487
OCME01036847
291597
Bacillota
TGC
Ala
>WENV180580063
OCME01000123
46643
Bacillota
TGA
Ser
>WENV180580012
OCME01000005
46643
Bacillota
TGA
Ser
>WENV180580425
OCME01022470
179755
Bacillota
CCG
Arg
>WENV180580264
OCME01005401
179755
Bacillota
CCG
Arg
>WENV180580181
OCME01002062
58120
Bacillota
AAG
Leu
>WENV180580088
OCME01000443
58120
Bacillota
AAG
Leu
>WENV180580120
OCME01000922
46835
Bacillota
TAA
Leu
>WENV180580082
OCME01000362
330413
Bacillota
CTT
Lys
>WENV180580492
OCME01038701
398832
Bacillota
TTC
Glu
>WENV180580773
OCME01195015
118669
Bacillota
GTA
Tyr
>WENV180580178
OCME01002010
118669
Bacillota
GTA
Tyr
>WENV180580497
OCME01038901
175915
Bacillota
GTC
Asp
>WENV180580215
OCME01002969
280476
Bacillota
TTT
Lys
>WENV180580213
OCME01002969
280476
Bacillota
TTT
Lys
>WENV180580035
OCME01000034
280462
Bacillota
GAA
Phe
>WENV180580009
OCME01000005
280462
Bacillota
GAA
Phe
>WENV180580041
OCME01000046
398852
Bacillota
CTC
Glu
>WENV180580008
OCME01000004
398852
Bacillota
CTC
Glu
>WENV180580005
OCME01000002
398852
Bacillota
CTC
Glu
>WENV180580586
OCME01067127
118370
Bacillota
TAG
Leu
>WENV180580102
OCME01000584
175857
Bacillota
GTG
His
>WENV180580095
OCME01000553
175857
Bacillota
GTG
His
>WENV180580057
OCME01000112
175857
Bacillota
GTG
His
>WENV180580210
OCME01002878
398833
Bacillota
TGT
Thr
>WENV180580782
OCME01195472
175849
Bacillota
GTC
Asp
>WENV180580739
OCME01159354
175849
Bacillota
GTC
Asp
>WENV180580097
OCME01000553
280463
Bacillota
TTT
Lys
>WENV180580036
OCME01000034
280463
Bacillota
TTT
Lys
>WENV180580530
OCME01047601
280486
Bacillota
TGC
Ala
>WENV180580477
OCME01033647
280486
Bacillota
TGC
Ala
>WENV180580394
OCME01015382
56074
Bacillota
TGA
Ser
>WENV180580152
OCME01001368
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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