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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180588798
OCOQ01000254
401934
Cyanobacteriota
GGT
Thr
>WENV180588784
OCOQ01000014
480623
Cyanobacteriota
TCC
Gly
>WENV180588853
OCOQ01003229
176188
Cyanobacteriota
CAT
Met
>WENV180588786
OCOQ01000067
118720
Cyanobacteriota
CAA
Leu
>WENV180588815
OCOQ01000598
285848
Cyanobacteriota
CAT
Met
>WENV180588832
OCOQ01001379
30082
Cyanobacteriota
TGA
Ser
>WENV180588792
OCOQ01000106
180925
Cyanobacteriota
ACG
Arg
>WENV180588783
OCOQ01000004
401929
Cyanobacteriota
TTG
Gln
>WENV180588785
OCOQ01000037
46946
Cyanobacteriota
TAA
Leu
>WENV180588804
OCOQ01000505
177109
Cyanobacteriota
CCT
Arg
>WENV180588793
OCOQ01000113
283431
Cyanobacteriota
GTG
His
>WENV180588922
OCOQ01022151
118688
Cyanobacteriota
TAG
Leu
>WENV180588801
OCOQ01000348
177220
Cyanobacteriota
CAT
Met
>WENV180588813
OCOQ01000575
219114
Cyanobacteriota
GGG
Pro
>WENV180588790
OCOQ01000089
177076
Cyanobacteriota
GTC
Asp
>WENV180588788
OCOQ01000085
366263
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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