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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593569
OCOX01080450
400818
Bacteroidota
TTC
Glu
>WENV180593558
OCOX01077382
120026
Bacteroidota
GTA
Tyr
>WENV180593675
OCOX01135944
23370
Bacteroidota
GGA
Ser
>WENV180593280
OCOX01015306
240785
Bacteroidota
GTC
Asp
>WENV180593309
OCOX01019808
74253
Bacteroidota
GCT
Ser
>WENV180593200
OCOX01006362
227539
Bacteroidota
GTT
Asn
>WENV180593455
OCOX01046292
336000
Bacteroidota
CAT
Met
>WENV180593454
OCOX01046292
340026
Bacteroidota
CAT
Met
>WENV180593146
OCOX01002050
233847
Bacteroidota
TGC
Ala
>WENV180593611
OCOX01104214
403841
Bacteroidota
GCC
Gly
>WENV180593612
OCOX01104214
74739
Bacteroidota
TAA
Leu
>WENV180593184
OCOX01004839
361792
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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