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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180595402
OCPD01017488
186414
Alphaproteobacteria
CAT
Met
>WENV180595292
OCPD01000974
179639
Alphaproteobacteria
ACG
Arg
>WENV180595518
OCPD01061151
424450
Alphaproteobacteria
GGT
Thr
>WENV180595400
OCPD01017254
140963
Alphaproteobacteria
>WENV180595284
OCPD01000212
201940
Alphaproteobacteria
CAT
Met
>WENV180595297
OCPD01001664
481268
Alphaproteobacteria
TCC
Gly
>WENV180595279
OCPD01000060
399480
Alphaproteobacteria
GAA
Phe
>WENV180595421
OCPD01022684
179386
Alphaproteobacteria
TCT
Arg
>WENV180595356
OCPD01009551
178503
Alphaproteobacteria
GGG
Pro
>WENV180595318
OCPD01003770
281650
Alphaproteobacteria
CCA
Trp
>WENV180595289
OCPD01000792
212319
Alphaproteobacteria
GTG
His
>WENV180595332
OCPD01005722
398994
Alphaproteobacteria
GTT
Asn
>WENV180595336
OCPD01006157
281676
Alphaproteobacteria
TAC
Val
>WENV180595312
OCPD01002970
413432
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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