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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180595836
OCPG01000044
189904
Gammaproteobacteria
CCA
Trp
>WENV180595858
OCPG01000393
189904
Gammaproteobacteria
CCA
Trp
>WENV180595993
OCPG01013969
176796
Gammaproteobacteria
GGG
Pro
>WENV180595871
OCPG01000832
284022
Gammaproteobacteria
TGT
Thr
>WENV180595960
OCPG01006320
178471
Gammaproteobacteria
GTT
Asn
>WENV180595945
OCPG01004748
282018
Gammaproteobacteria
TGT
Thr
>WENV180596047
OCPG01032912
179710
Gammaproteobacteria
GAC
Val
>WENV180595864
OCPG01000494
118640
Gammaproteobacteria
TAG
Leu
>WENV180595849
OCPG01000177
118640
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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