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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180602333
OCPR01000801
204388
Verrucomicrobiota
CAT
Met
>WENV180601820
OCPR01000060
406043
Verrucomicrobiota
GCA
Cys
>WENV180601852
OCPR01000079
293125
Verrucomicrobiota
GAA
Phe
>WENV180602144
OCPR01000352
406350
Verrucomicrobiota
TGT
Thr
>WENV180602136
OCPR01000332
148006
Verrucomicrobiota
CAA
Leu
>WENV180601819
OCPR01000060
101600
Verrucomicrobiota
AAG
Leu
>WENV180601818
OCPR01000060
293105
Verrucomicrobiota
CAT
Met
>WENV180601923
OCPR01000146
405901
Verrucomicrobiota
GCC
Gly
>WENV180601815
OCPR01000060
405901
Verrucomicrobiota
GCC
Gly
>WENV180601854
OCPR01000079
483642
Verrucomicrobiota
CCC
Gly
>WENV180602004
OCPR01000211
8960
Verrucomicrobiota
CGA
Ser
>WENV180602132
OCPR01000332
101463
Verrucomicrobiota
TAA
Leu
>WENV180602280
OCPR01000611
157427
Verrucomicrobiota
GTC
Asp
>WENV180602145
OCPR01000352
293079
Verrucomicrobiota
CGC
Ala
>WENV180601721
OCPR01000020
120352
Verrucomicrobiota
TAG
Leu
>WENV180602133
OCPR01000332
292636
Verrucomicrobiota
>WENV180601851
OCPR01000079
489412
Verrucomicrobiota
TCC
Gly
>WENV180601816
OCPR01000060
298263
Verrucomicrobiota
TTC
Glu
>WENV180601812
OCPR01000060
298263
Verrucomicrobiota
TTC
Glu
>WENV180601969
OCPR01000177
293069
Verrucomicrobiota
CTT
Lys
>WENV180601968
OCPR01000177
293069
Verrucomicrobiota
CTT
Lys
>WENV180601720
OCPR01000020
406336
Verrucomicrobiota
CCT
Arg
>WENV180601855
OCPR01000079
406369
Verrucomicrobiota
CCG
Arg
>WENV180601919
OCPR01000136
405940
Verrucomicrobiota
GGT
Thr
>WENV180601836
OCPR01000072
406044
Verrucomicrobiota
CTG
Gln
>WENV180601722
OCPR01000020
187556
Verrucomicrobiota
GGG
Pro
>WENV180601817
OCPR01000060
406037
Verrucomicrobiota
GTG
His
>WENV180602467
OCPR01001205
406360
Verrucomicrobiota
GAC
Val
>WENV180601698
OCPR01000014
187548
Verrucomicrobiota
TCT
Arg
>WENV180601967
OCPR01000177
406040
Verrucomicrobiota
CGT
Thr
>WENV180601814
OCPR01000060
57652
Verrucomicrobiota
TGA
Ser
>WENV180602156
OCPR01000363
406039
Verrucomicrobiota
CAC
Val
>WENV180602389
OCPR01000923
75458
Verrucomicrobiota
CAG
Leu
>WENV180601835
OCPR01000072
406368
Verrucomicrobiota
TTG
Gln
>WENV180601782
OCPR01000043
21159
Verrucomicrobiota
GGA
Ser
>WENV180601892
OCPR01000102
101461
Verrucomicrobiota
GTA
Tyr
>WENV180601697
OCPR01000014
293095
Verrucomicrobiota
TTT
Lys
>WENV180601966
OCPR01000177
187561
Verrucomicrobiota
CGG
Pro
>WENV180601813
OCPR01000060
406342
Verrucomicrobiota
CAT
Met
>WENV180601891
OCPR01000102
406351
Verrucomicrobiota
GTT
Asn
>WENV180601834
OCPR01000072
303305
Verrucomicrobiota
GGC
Ala
>WENV180601996
OCPR01000197
406346
Verrucomicrobiota
TAC
Val
>WENV180602134
OCPR01000332
8938
Verrucomicrobiota
GCT
Ser
>WENV180601853
OCPR01000079
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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