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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180629492
OCQP01107111
117741
Bacteroidota
TAG
Leu
>WENV180628903
OCQP01003907
289031
Bacteroidota
CAT
Met
>WENV180629276
OCQP01069142
280557
Bacteroidota
CAT
Met
>WENV180628913
OCQP01005430
20206
Bacteroidota
GGA
Ser
>WENV180629391
OCQP01086884
398871
Bacteroidota
TTC
Glu
>WENV180629991
OCQP01393328
201819
Bacteroidota
CAT
Met
>WENV180629437
OCQP01097261
175906
Bacteroidota
GTG
His
>WENV180628992
OCQP01014772
175908
Bacteroidota
GTC
Asp
>WENV180628860
OCQP01000088
280530
Bacteroidota
CCA
Trp
>WENV180629724
OCQP01182684
178907
Bacteroidota
TCT
Arg
>WENV180629749
OCQP01193408
20449
Bacteroidota
GGA
Ser
>WENV180629648
OCQP01160377
56072
Bacteroidota
TAA
Leu
>WENV180629611
OCQP01144304
56072
Bacteroidota
TAA
Leu
>WENV180629996
OCQP01395902
99847
Bacteroidota
GTA
Tyr
>WENV180628958
OCQP01010648
399200
Bacteroidota
CAT
Met
>WENV180629598
OCQP01138890
186874
Bacteroidota
CAT
Met
>WENV180629985
OCQP01389952
488746
Bacteroidota
CTG
Gln
>WENV180630031
OCQP01400092
280478
Bacteroidota
GCC
Gly
>WENV180629816
OCQP01228322
280478
Bacteroidota
GCC
Gly
>WENV180629104
OCQP01032295
73011
Bacteroidota
CAA
Leu
>WENV180628888
OCQP01002450
280515
Bacteroidota
CCA
Trp
>WENV180629049
OCQP01020837
158068
Bacteroidota
GGG
Pro
>WENV180629779
OCQP01209928
186142
Bacteroidota
GAT
Ile
>WENV180629810
OCQP01226650
74084
Bacteroidota
CAG
Leu
>WENV180630022
OCQP01399554
159415
Bacteroidota
TAC
Val
>WENV180629853
OCQP01265169
140771
Bacteroidota
>WENV180628859
OCQP01000088
400088
Bacteroidota
GGT
Thr
>WENV180629223
OCQP01056861
280446
Bacteroidota
TTT
Lys
>WENV180629410
OCQP01090318
484496
Bacteroidota
TTG
Gln
>WENV180628907
OCQP01004750
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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