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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180637255
OCRG01004590
400818
Bacteroidota
TTC
Glu
>WENV180637937
OCRG01197453
170858
Bacteroidota
TGG
Pro
>WENV180637163
OCRG01001090
156076
Bacteroidota
TAC
Val
>WENV180637160
OCRG01000998
281538
Bacteroidota
GAA
Phe
>WENV180637159
OCRG01000860
209752
Bacteroidota
GGC
Ala
>WENV180637628
OCRG01066464
156605
Bacteroidota
GAC
Val
>WENV180637201
OCRG01002471
23370
Bacteroidota
GGA
Ser
>WENV180637170
OCRG01001454
364431
Bacteroidota
TCC
Gly
>WENV180637645
OCRG01072845
155808
Bacteroidota
TGG
Pro
>WENV180637422
OCRG01020098
340026
Bacteroidota
CAT
Met
>WENV180637392
OCRG01016612
206043
Bacteroidota
GTC
Asp
>WENV180637134
OCRG01000510
307577
Bacteroidota
>WENV180637561
OCRG01047173
284313
Bacteroidota
TTT
Lys
>WENV180637292
OCRG01006714
233847
Bacteroidota
TGC
Ala
>WENV180637741
OCRG01107440
192374
Bacteroidota
GAT
Ile
>WENV180637663
OCRG01076645
156340
Bacteroidota
GGG
Pro
>WENV180637488
OCRG01028050
156340
Bacteroidota
GGG
Pro
>WENV180637543
OCRG01041028
56162
Bacteroidota
TGA
Ser
>WENV180637143
OCRG01000597
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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