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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180699070
ODDM01000048
285360
Bacteroidota
TTT
Lys
>WENV180699218
ODDM01000216
117741
Bacteroidota
TAG
Leu
>WENV180699011
ODDM01000011
398829
Bacteroidota
CCT
Arg
>WENV180699705
ODDM01006871
398829
Bacteroidota
CCT
Arg
>WENV180700148
ODDM01128402
175838
Bacteroidota
GTT
Asn
>WENV180699164
ODDM01000154
404226
Bacteroidota
CCT
Arg
>WENV180699513
ODDM01001193
404226
Bacteroidota
CCT
Arg
>WENV180699081
ODDM01000054
175904
Bacteroidota
CGG
Pro
>WENV180699041
ODDM01000023
175904
Bacteroidota
CGG
Pro
>WENV180698983
ODDM01000001
289031
Bacteroidota
CAT
Met
>WENV180699253
ODDM01000262
280553
Bacteroidota
TTT
Lys
>WENV180699181
ODDM01000182
280553
Bacteroidota
TTT
Lys
>WENV180699358
ODDM01000406
280557
Bacteroidota
CAT
Met
>WENV180699067
ODDM01000043
20492
Bacteroidota
GGA
Ser
>WENV180699102
ODDM01000065
20206
Bacteroidota
GGA
Ser
>WENV180699010
ODDM01000010
483416
Bacteroidota
CTG
Gln
>WENV180699166
ODDM01000154
398871
Bacteroidota
TTC
Glu
>WENV180699165
ODDM01000154
398871
Bacteroidota
TTC
Glu
>WENV180698998
ODDM01000005
201819
Bacteroidota
CAT
Met
>WENV180699051
ODDM01000029
175906
Bacteroidota
GTG
His
>WENV180699050
ODDM01000029
175906
Bacteroidota
GTG
His
>WENV180699213
ODDM01000203
175903
Bacteroidota
GTG
His
>WENV180699389
ODDM01000507
351598
Bacteroidota
CGG
Pro
>WENV180699372
ODDM01000460
351598
Bacteroidota
CGG
Pro
>WENV180699367
ODDM01000435
351598
Bacteroidota
CGG
Pro
>WENV180699189
ODDM01000189
351598
Bacteroidota
CGG
Pro
>WENV180699134
ODDM01000112
351598
Bacteroidota
CGG
Pro
>WENV180699162
ODDM01000150
118089
Bacteroidota
TAG
Leu
>WENV180699002
ODDM01000008
118089
Bacteroidota
TAG
Leu
>WENV180699082
ODDM01000054
280530
Bacteroidota
CCA
Trp
>WENV180699585
ODDM01002269
175936
Bacteroidota
CAT
Met
>WENV180699176
ODDM01000169
203954
Bacteroidota
GTC
Asp
>WENV180699175
ODDM01000169
203954
Bacteroidota
GTC
Asp
>WENV180699036
ODDM01000020
203954
Bacteroidota
GTC
Asp
>WENV180699093
ODDM01000059
178907
Bacteroidota
TCT
Arg
>WENV180699125
ODDM01000100
405877
Bacteroidota
GGT
Thr
>WENV180699316
ODDM01000336
20449
Bacteroidota
GGA
Ser
>WENV180699129
ODDM01000107
20449
Bacteroidota
GGA
Ser
>WENV180699084
ODDM01000054
20449
Bacteroidota
GGA
Ser
>WENV180699095
ODDM01000060
21127
Bacteroidota
GGA
Ser
>WENV180699013
ODDM01000011
56072
Bacteroidota
TAA
Leu
>WENV180699078
ODDM01000049
175902
Bacteroidota
GGC
Ala
>WENV180699072
ODDM01000048
398860
Bacteroidota
CTC
Glu
>WENV180699062
ODDM01000036
398860
Bacteroidota
CTC
Glu
>WENV180699465
ODDM01000905
480404
Bacteroidota
TTG
Gln
>WENV180699438
ODDM01000744
280451
Bacteroidota
CGT
Thr
>WENV180699262
ODDM01000277
99847
Bacteroidota
GTA
Tyr
>WENV180699089
ODDM01000056
99847
Bacteroidota
GTA
Tyr
>WENV180699023
ODDM01000016
99847
Bacteroidota
GTA
Tyr
>WENV180699456
ODDM01000816
399200
Bacteroidota
CAT
Met
>WENV180699028
ODDM01000017
399200
Bacteroidota
CAT
Met
>WENV180699027
ODDM01000017
399200
Bacteroidota
CAT
Met
>WENV180698988
ODDM01000001
186874
Bacteroidota
CAT
Met
>WENV180699101
ODDM01000065
488746
Bacteroidota
CTG
Gln
>WENV180700049
ODDM01073394
280478
Bacteroidota
GCC
Gly
>WENV180700047
ODDM01073394
280478
Bacteroidota
GCC
Gly
>WENV180699289
ODDM01000308
280478
Bacteroidota
GCC
Gly
>WENV180699287
ODDM01000308
280478
Bacteroidota
GCC
Gly
>WENV180699045
ODDM01000026
280478
Bacteroidota
GCC
Gly
>WENV180699018
ODDM01000015
280478
Bacteroidota
GCC
Gly
>WENV180698997
ODDM01000004
175844
Bacteroidota
GGC
Ala
>WENV180699161
ODDM01000150
73011
Bacteroidota
CAA
Leu
>WENV180699878
ODDM01022230
183889
Bacteroidota
GGC
Ala
>WENV180699088
ODDM01000055
398828
Bacteroidota
CCG
Arg
>WENV180699085
ODDM01000054
74084
Bacteroidota
CAG
Leu
>WENV180699019
ODDM01000015
74084
Bacteroidota
CAG
Leu
>WENV180699329
ODDM01000365
159415
Bacteroidota
TAC
Val
>WENV180699328
ODDM01000365
159415
Bacteroidota
TAC
Val
>WENV180699491
ODDM01001073
480325
Bacteroidota
CTG
Gln
>WENV180699490
ODDM01001073
480325
Bacteroidota
CTG
Gln
>WENV180700061
ODDM01081557
140771
Bacteroidota
>WENV180699415
ODDM01000601
176192
Bacteroidota
TCT
Arg
>WENV180699124
ODDM01000099
176192
Bacteroidota
TCT
Arg
>WENV180699804
ODDM01014218
400088
Bacteroidota
GGT
Thr
>WENV180699437
ODDM01000729
69204
Bacteroidota
TGA
Ser
>WENV180699179
ODDM01000180
69204
Bacteroidota
TGA
Ser
>WENV180699097
ODDM01000062
69204
Bacteroidota
TGA
Ser
>WENV180699297
ODDM01000317
280446
Bacteroidota
TTT
Lys
>WENV180699205
ODDM01000199
280446
Bacteroidota
TTT
Lys
>WENV180699131
ODDM01000109
280446
Bacteroidota
TTT
Lys
>WENV180699127
ODDM01000105
280446
Bacteroidota
TTT
Lys
>WENV180699047
ODDM01000027
484496
Bacteroidota
TTG
Gln
>WENV180699016
ODDM01000013
484496
Bacteroidota
TTG
Gln
>WENV180700135
ODDM01126563
27502
Bacteroidota
GGA
Ser
>WENV180699429
ODDM01000680
27502
Bacteroidota
GGA
Ser
>WENV180699326
ODDM01000361
27502
Bacteroidota
GGA
Ser
>WENV180699187
ODDM01000186
285750
Bacteroidota
CCC
Gly
>WENV180699148
ODDM01000128
285750
Bacteroidota
CCC
Gly
>WENV180699117
ODDM01000087
365112
Bacteroidota
TTT
Lys
>WENV180699063
ODDM01000038
365112
Bacteroidota
TTT
Lys
>WENV180699278
ODDM01000294
398836
Bacteroidota
GCA
Cys
>WENV180699255
ODDM01000265
398836
Bacteroidota
GCA
Cys
>WENV180699200
ODDM01000197
398836
Bacteroidota
GCA
Cys
>WENV180699154
ODDM01000137
398836
Bacteroidota
GCA
Cys
>WENV180699147
ODDM01000124
398836
Bacteroidota
GCA
Cys
>WENV180698995
ODDM01000003
398836
Bacteroidota
GCA
Cys
>WENV180699266
ODDM01000285
170323
Bacteroidota
GGG
Pro
>WENV180699100
ODDM01000065
170323
Bacteroidota
GGG
Pro
>WENV180699053
ODDM01000030
170323
Bacteroidota
GGG
Pro
>WENV180699030
ODDM01000019
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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