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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180702281
ODEE01005434
99852
Bacillota
GTA
Tyr
>WENV180702333
ODEE01008153
99852
Bacillota
GTA
Tyr
>WENV180702370
ODEE01012194
99852
Bacillota
GTA
Tyr
>WENV180702524
ODEE01040767
99852
Bacillota
GTA
Tyr
>WENV180702441
ODEE01019763
343590
Bacillota
GCC
Gly
>WENV180702731
ODEE01137561
280500
Bacillota
TGC
Ala
>WENV180702335
ODEE01008178
349107
Bacillota
GCC
Gly
>WENV180702390
ODEE01014258
349107
Bacillota
GCC
Gly
>WENV180702464
ODEE01023029
349107
Bacillota
GCC
Gly
>WENV180702494
ODEE01028715
349107
Bacillota
GCC
Gly
>WENV180702391
ODEE01014258
405363
Bacillota
GCA
Cys
>WENV180702610
ODEE01065725
290391
Bacillota
TAC
Val
>WENV180702047
ODEE01001467
290391
Bacillota
TAC
Val
>WENV180702732
ODEE01137568
280428
Bacillota
GAA
Phe
>WENV180702395
ODEE01014371
280428
Bacillota
GAA
Phe
>WENV180702334
ODEE01008178
280428
Bacillota
GAA
Phe
>WENV180702338
ODEE01008768
405357
Bacillota
TTC
Glu
>WENV180701721
ODEE01000410
405357
Bacillota
TTC
Glu
>WENV180702328
ODEE01007648
291579
Bacillota
GAA
Phe
>WENV180701994
ODEE01001224
229015
Bacillota
GTG
His
>WENV180701796
ODEE01000539
179917
Bacillota
CAT
Met
>WENV180702495
ODEE01028715
280466
Bacillota
TAC
Val
>WENV180701783
ODEE01000533
280492
Bacillota
CTT
Lys
>WENV180701558
ODEE01000212
280492
Bacillota
CTT
Lys
>WENV180702314
ODEE01007027
175842
Bacillota
CAC
Val
>WENV180702198
ODEE01003113
175842
Bacillota
CAC
Val
>WENV180702171
ODEE01002642
175842
Bacillota
CAC
Val
>WENV180702317
ODEE01007091
236579
Bacillota
GAT
Ile
>WENV180702396
ODEE01014405
184497
Bacillota
GGG
Pro
>WENV180702316
ODEE01007091
295166
Bacillota
TGC
Ala
>WENV180702588
ODEE01058449
190476
Bacillota
CAT
Met
>WENV180701769
ODEE01000502
73664
Bacillota
CAG
Leu
>WENV180701534
ODEE01000176
73664
Bacillota
CAG
Leu
>WENV180702457
ODEE01022279
280447
Bacillota
GAC
Val
>WENV180702342
ODEE01009135
280447
Bacillota
GAC
Val
>WENV180702185
ODEE01002773
280447
Bacillota
GAC
Val
>WENV180702168
ODEE01002516
280447
Bacillota
GAC
Val
>WENV180702265
ODEE01004961
5692
Bacillota
GCT
Ser
>WENV180702662
ODEE01104127
175825
Bacillota
GAT
Ile
>WENV180701978
ODEE01001151
284723
Bacillota
TAC
Val
>WENV180701793
ODEE01000539
284723
Bacillota
TAC
Val
>WENV180702528
ODEE01041229
73009
Bacillota
CAG
Leu
>WENV180702309
ODEE01006718
73009
Bacillota
CAG
Leu
>WENV180702244
ODEE01004559
73009
Bacillota
CAG
Leu
>WENV180701949
ODEE01001018
407726
Bacillota
CTG
Gln
>WENV180702267
ODEE01005031
291581
Bacillota
CGG
Pro
>WENV180702064
ODEE01001561
291581
Bacillota
CGG
Pro
>WENV180702526
ODEE01041229
175859
Bacillota
TCT
Arg
>WENV180702202
ODEE01003157
280436
Bacillota
TGC
Ala
>WENV180702656
ODEE01096522
175847
Bacillota
GTC
Asp
>WENV180702720
ODEE01137456
290325
Bacillota
GCC
Gly
>WENV180701965
ODEE01001073
290325
Bacillota
GCC
Gly
>WENV180701601
ODEE01000260
290325
Bacillota
GCC
Gly
>WENV180702697
ODEE01134802
175831
Bacillota
ACG
Arg
>WENV180701993
ODEE01001224
179810
Bacillota
TCT
Arg
>WENV180702301
ODEE01006157
480322
Bacillota
CTG
Gln
>WENV180702266
ODEE01005031
480322
Bacillota
CTG
Gln
>WENV180702243
ODEE01004478
480322
Bacillota
CTG
Gln
>WENV180702063
ODEE01001561
480322
Bacillota
CTG
Gln
>WENV180701934
ODEE01000980
187364
Bacillota
CAT
Met
>WENV180702478
ODEE01025741
175868
Bacillota
GTT
Asn
>WENV180702394
ODEE01014370
175868
Bacillota
GTT
Asn
>WENV180702308
ODEE01006631
175868
Bacillota
GTT
Asn
>WENV180702246
ODEE01004611
175868
Bacillota
GTT
Asn
>WENV180702235
ODEE01004110
175868
Bacillota
GTT
Asn
>WENV180702229
ODEE01003909
175868
Bacillota
GTT
Asn
>WENV180702290
ODEE01005564
314834
Bacillota
TGC
Ala
>WENV180702307
ODEE01006631
398854
Bacillota
CTC
Glu
>WENV180702234
ODEE01004110
398854
Bacillota
CTC
Glu
>WENV180702228
ODEE01003909
398854
Bacillota
CTC
Glu
>WENV180702284
ODEE01005500
291576
Bacillota
CCC
Gly
>WENV180702462
ODEE01022920
480324
Bacillota
TTG
Gln
>WENV180702412
ODEE01016507
480324
Bacillota
TTG
Gln
>WENV180702679
ODEE01119372
497729
Bacillota
CCA
Trp
>WENV180702312
ODEE01006979
497729
Bacillota
CCA
Trp
>WENV180702048
ODEE01001472
175899
Bacillota
GTC
Asp
>WENV180701889
ODEE01000776
303718
Bacillota
TGT
Thr
>WENV180702258
ODEE01004870
303718
Bacillota
TGT
Thr
>WENV180701533
ODEE01000176
56079
Bacillota
AAG
Leu
>WENV180701532
ODEE01000176
56079
Bacillota
AAG
Leu
>WENV180702699
ODEE01134832
332891
Bacillota
TGC
Ala
>WENV180702554
ODEE01048093
323864
Bacillota
TGC
Ala
>WENV180702129
ODEE01002073
186051
Bacillota
GAT
Ile
>WENV180702585
ODEE01057120
398857
Bacillota
TTC
Glu
>WENV180702431
ODEE01018596
117745
Bacillota
GTA
Tyr
>WENV180702300
ODEE01006142
117745
Bacillota
GTA
Tyr
>WENV180701761
ODEE01000484
117745
Bacillota
GTA
Tyr
>WENV180702702
ODEE01134945
280444
Bacillota
GGT
Thr
>WENV180702350
ODEE01009788
280444
Bacillota
GGT
Thr
>WENV180702306
ODEE01006458
280444
Bacillota
GGT
Thr
>WENV180702263
ODEE01004955
280444
Bacillota
GGT
Thr
>WENV180702594
ODEE01059414
291597
Bacillota
TGC
Ala
>WENV180701497
ODEE01000147
46643
Bacillota
TGA
Ser
>WENV180702550
ODEE01047932
46643
Bacillota
TGA
Ser
>WENV180702563
ODEE01050515
179755
Bacillota
CCG
Arg
>WENV180702496
ODEE01028982
179755
Bacillota
CCG
Arg
>WENV180702353
ODEE01009976
179755
Bacillota
CCG
Arg
>WENV180702589
ODEE01058449
398832
Bacillota
TTC
Glu
>WENV180702433
ODEE01018596
280462
Bacillota
GAA
Phe
>WENV180701498
ODEE01000147
280462
Bacillota
GAA
Phe
>WENV180701762
ODEE01000484
398852
Bacillota
CTC
Glu
>WENV180701505
ODEE01000155
398852
Bacillota
CTC
Glu
>WENV180701419
ODEE01000087
398852
Bacillota
CTC
Glu
>WENV180702021
ODEE01001334
175857
Bacillota
GTG
His
>WENV180702613
ODEE01065725
285756
Bacillota
GCC
Gly
>WENV180702280
ODEE01005434
398833
Bacillota
TGT
Thr
>WENV180702233
ODEE01004035
398833
Bacillota
TGT
Thr
>WENV180702721
ODEE01137491
175849
Bacillota
GTC
Asp
>WENV180702701
ODEE01134945
175849
Bacillota
GTC
Asp
>WENV180702262
ODEE01004955
175849
Bacillota
GTC
Asp
>WENV180702023
ODEE01001334
280463
Bacillota
TTT
Lys
>WENV180702434
ODEE01018596
280463
Bacillota
TTT
Lys
>WENV180702264
ODEE01004961
56074
Bacillota
TGA
Ser
>WENV180702461
ODEE01022916
280473
Bacillota
TGG
Pro
>WENV180702260
ODEE01004908
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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