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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180710894
ODFM01018180
175883
Actinomycetota
GAT
Ile
>WENV180710896
ODFM01018180
175883
Actinomycetota
GAT
Ile
>WENV180710677
ODFM01005663
280503
Actinomycetota
CCT
Arg
>WENV180710603
ODFM01003548
398843
Actinomycetota
GTT
Asn
>WENV180710799
ODFM01010344
298224
Actinomycetota
GGC
Ala
>WENV180710652
ODFM01004709
241064
Actinomycetota
CTC
Glu
>WENV180710993
ODFM01028563
241064
Actinomycetota
CTC
Glu
>WENV180711320
ODFM01160449
481719
Actinomycetota
GCA
Cys
>WENV180710678
ODFM01005687
291585
Actinomycetota
GCC
Gly
>WENV180710638
ODFM01004315
291585
Actinomycetota
GCC
Gly
>WENV180710856
ODFM01013958
175926
Actinomycetota
CAT
Met
>WENV180710651
ODFM01004709
483206
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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