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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180745828
ODHL01044719
99852
Bacillota
GTA
Tyr
>WENV180745860
ODHL01064865
296855
Bacillota
GGT
Thr
>WENV180745862
ODHL01067348
48505
Bacillota
TGA
Ser
>WENV180745858
ODHL01064134
280492
Bacillota
CTT
Lys
>WENV180745803
ODHL01035798
295166
Bacillota
TGC
Ala
>WENV180745763
ODHL01013894
175825
Bacillota
GAT
Ile
>WENV180745818
ODHL01041725
73009
Bacillota
CAG
Leu
>WENV180745762
ODHL01013894
280436
Bacillota
TGC
Ala
>WENV180745835
ODHL01052805
332181
Bacillota
TGT
Thr
>WENV180745806
ODHL01036520
178152
Bacillota
GTT
Asn
>WENV180745759
ODHL01012670
175868
Bacillota
GTT
Asn
>WENV180745758
ODHL01012670
398854
Bacillota
CTC
Glu
>WENV180745825
ODHL01044051
117745
Bacillota
GTA
Tyr
>WENV180745748
ODHL01009409
280462
Bacillota
GAA
Phe
>WENV180745754
ODHL01011117
398852
Bacillota
CTC
Glu
>WENV180745820
ODHL01042688
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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