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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180750376
ODHS01001727
109178
Gammaproteobacteria
CAA
Leu
>WENV180750674
ODHS01005417
284044
Gammaproteobacteria
TTC
Glu
>WENV180750562
ODHS01003752
5699
Gammaproteobacteria
GCT
Ser
>WENV180750929
ODHS01012965
176446
Gammaproteobacteria
CAT
Met
>WENV180750552
ODHS01003712
451238
Gammaproteobacteria
GCC
Gly
>WENV180750842
ODHS01009943
178974
Gammaproteobacteria
GAC
Val
>WENV180750909
ODHS01012444
127466
Gammaproteobacteria
TAG
Leu
>WENV180750449
ODHS01002450
31109
Gammaproteobacteria
GGA
Ser
>WENV180750405
ODHS01001956
4148
Gammaproteobacteria
>WENV180751577
ODHS01076628
178975
Gammaproteobacteria
CTT
Lys
>WENV180751942
ODHS01271577
178975
Gammaproteobacteria
CTT
Lys
>WENV180751300
ODHS01039890
401175
Gammaproteobacteria
TTG
Gln
>WENV180751963
ODHS01282569
401175
Gammaproteobacteria
TTG
Gln
>WENV180750479
ODHS01002679
4023
Gammaproteobacteria
>WENV180750808
ODHS01008749
238652
Gammaproteobacteria
CAT
Met
>WENV180750496
ODHS01002854
29761
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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