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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180775119
ODIJ01238951
183770
Fusobacteriota
GAT
Ile
>WENV180773783
ODIJ01002151
187804
Fusobacteriota
GTC
Asp
>WENV180773912
ODIJ01004275
187804
Fusobacteriota
GTC
Asp
>WENV180773919
ODIJ01004275
187804
Fusobacteriota
GTC
Asp
>WENV180773780
ODIJ01002151
141145
Fusobacteriota
>WENV180773782
ODIJ01002151
288879
Fusobacteriota
TAC
Val
>WENV180773911
ODIJ01004275
288879
Fusobacteriota
TAC
Val
>WENV180773918
ODIJ01004275
288879
Fusobacteriota
TAC
Val
>WENV180774039
ODIJ01006862
119283
Fusobacteriota
GTA
Tyr
>WENV180773880
ODIJ01003682
289706
Fusobacteriota
GTG
His
>WENV180773772
ODIJ01002083
280538
Fusobacteriota
TTT
Lys
>WENV180774113
ODIJ01008936
280538
Fusobacteriota
TTT
Lys
>WENV180774131
ODIJ01009287
184485
Fusobacteriota
GTC
Asp
>WENV180773393
ODIJ01000158
184485
Fusobacteriota
GTC
Asp
>WENV180774707
ODIJ01059117
184487
Fusobacteriota
TCT
Arg
>WENV180773596
ODIJ01000708
184487
Fusobacteriota
TCT
Arg
>WENV180773922
ODIJ01004275
183767
Fusobacteriota
TGC
Ala
>WENV180773774
ODIJ01002083
156979
Fusobacteriota
CAT
Met
>WENV180773769
ODIJ01002083
57899
Fusobacteriota
TAA
Leu
>WENV180775121
ODIJ01239496
196958
Fusobacteriota
GAT
Ile
>WENV180773595
ODIJ01000708
289707
Fusobacteriota
TTT
Lys
>WENV180774387
ODIJ01020628
292614
Fusobacteriota
TGC
Ala
>WENV180773909
ODIJ01004228
187240
Fusobacteriota
TCG
Arg
>WENV180774038
ODIJ01006841
288877
Fusobacteriota
GTT
Asn
>WENV180773746
ODIJ01001886
288877
Fusobacteriota
GTT
Asn
>WENV180773881
ODIJ01003682
292724
Fusobacteriota
TTT
Lys
>WENV180774706
ODIJ01059117
292724
Fusobacteriota
TTT
Lys
>WENV180773917
ODIJ01004275
407549
Fusobacteriota
TTC
Glu
>WENV180774523
ODIJ01030482
288878
Fusobacteriota
TGT
Thr
>WENV180773920
ODIJ01004275
288878
Fusobacteriota
TGT
Thr
>WENV180774130
ODIJ01009287
289739
Fusobacteriota
TAC
Val
>WENV180773392
ODIJ01000158
289739
Fusobacteriota
TAC
Val
>WENV180774132
ODIJ01009287
289708
Fusobacteriota
TGT
Thr
>WENV180773875
ODIJ01003601
289708
Fusobacteriota
TGT
Thr
>WENV180773394
ODIJ01000158
289708
Fusobacteriota
TGT
Thr
>WENV180773773
ODIJ01002083
183769
Fusobacteriota
TCT
Arg
>WENV180773914
ODIJ01004275
484173
Fusobacteriota
GCA
Cys
>WENV180774112
ODIJ01008936
288876
Fusobacteriota
GTG
His
>WENV180773622
ODIJ01000833
183773
Fusobacteriota
CCT
Arg
>WENV180774302
ODIJ01016406
74687
Fusobacteriota
CAA
Leu
>WENV180774301
ODIJ01016406
183772
Fusobacteriota
ACG
Arg
>WENV180774110
ODIJ01008936
202720
Fusobacteriota
TGG
Pro
>WENV180773837
ODIJ01002821
202720
Fusobacteriota
TGG
Pro
>WENV180774114
ODIJ01008936
141384
Fusobacteriota
TAG
Leu
>WENV180773921
ODIJ01004275
141384
Fusobacteriota
TAG
Leu
>WENV180773770
ODIJ01002083
183768
Fusobacteriota
CAT
Met
>WENV180773923
ODIJ01004275
192090
Fusobacteriota
CAT
Met
>WENV180773916
ODIJ01004275
288880
Fusobacteriota
CTT
Lys
>WENV180773432
ODIJ01000254
47168
Fusobacteriota
GCT
Ser
>WENV180773356
ODIJ01000084
404073
Fusobacteriota
TTG
Gln
>WENV180773779
ODIJ01002151
403662
Fusobacteriota
TTC
Glu
>WENV180775161
ODIJ01249166
403662
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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