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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180785887
ODIR01043867
179231
Actinomycetota
TAC
Val
>WENV180786109
ODIR01083014
176499
Actinomycetota
CAT
Met
>WENV180785254
ODIR01005137
175883
Actinomycetota
GAT
Ile
>WENV180785256
ODIR01005137
175883
Actinomycetota
GAT
Ile
>WENV180786349
ODIR01186867
175907
Actinomycetota
TAC
Val
>WENV180785983
ODIR01059300
280498
Actinomycetota
GTT
Asn
>WENV180785984
ODIR01059300
280498
Actinomycetota
GTT
Asn
>WENV180785141
ODIR01003570
280503
Actinomycetota
CCT
Arg
>WENV180786166
ODIR01104109
140768
Actinomycetota
TAG
Leu
>WENV180785605
ODIR01018052
59689
Actinomycetota
GGA
Ser
>WENV180785829
ODIR01034645
175837
Actinomycetota
ACG
Arg
>WENV180786034
ODIR01067680
280549
Actinomycetota
CAC
Val
>WENV180785088
ODIR01003161
398843
Actinomycetota
GTT
Asn
>WENV180786052
ODIR01072137
176077
Actinomycetota
CAT
Met
>WENV180784691
ODIR01000811
481719
Actinomycetota
GCA
Cys
>WENV180784690
ODIR01000811
291585
Actinomycetota
GCC
Gly
>WENV180784692
ODIR01000811
291585
Actinomycetota
GCC
Gly
>WENV180785862
ODIR01040482
175841
Actinomycetota
TAT
Ile
>WENV180784683
ODIR01000794
280536
Actinomycetota
CTT
Lys
>WENV180784684
ODIR01000794
280536
Actinomycetota
CTT
Lys
>WENV180785989
ODIR01060139
280496
Actinomycetota
CGT
Thr
>WENV180786312
ODIR01164851
280703
Actinomycetota
CCT
Arg
>WENV180784713
ODIR01000867
175926
Actinomycetota
CAT
Met
>WENV180786072
ODIR01076376
480329
Actinomycetota
CCC
Gly
>WENV180785081
ODIR01003106
483206
Actinomycetota
CTG
Gln
>WENV180786174
ODIR01107244
99865
Actinomycetota
CAG
Leu
>WENV180786129
ODIR01090429
222475
Actinomycetota
CTT
Lys
>WENV180786421
ODIR01238831
480319
Actinomycetota
TTG
Gln
>WENV180785876
ODIR01042204
280499
Actinomycetota
CCT
Arg
>WENV180786154
ODIR01098261
398853
Actinomycetota
CTG
Gln
>WENV180785698
ODIR01022636
175843
Actinomycetota
CAA
Leu
>WENV180786307
ODIR01162559
203883
Actinomycetota
TCT
Arg
>WENV180785725
ODIR01024853
46642
Actinomycetota
CGA
Ser
>WENV180786001
ODIR01062381
317680
Actinomycetota
CCG
Arg
>WENV180786153
ODIR01098261
289788
Actinomycetota
CTC
Glu
>WENV180786108
ODIR01083014
117903
Actinomycetota
GTA
Tyr
>WENV180785840
ODIR01037026
56071
Actinomycetota
TGA
Ser
>WENV180786358
ODIR01196023
147796
Actinomycetota
TAA
Leu
>WENV180785994
ODIR01060652
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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