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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180795094
ODIZ01027138
288834
Bacillota
TAC
Val
>WENV180794706
ODIZ01004090
283303
Bacillota
GTC
Asp
>WENV180794773
ODIZ01005584
283303
Bacillota
GTC
Asp
>WENV180795184
ODIZ01047036
212982
Bacillota
ACG
Arg
>WENV180795189
ODIZ01049214
280500
Bacillota
TGC
Ala
>WENV180795384
ODIZ01157959
289121
Bacillota
CCA
Trp
>WENV180795156
ODIZ01038190
184537
Bacillota
ACG
Arg
>WENV180794991
ODIZ01015259
221826
Bacillota
ACG
Arg
>WENV180795228
ODIZ01057593
408526
Bacillota
GCA
Cys
>WENV180794888
ODIZ01008981
296855
Bacillota
GGT
Thr
>WENV180795383
ODIZ01157959
287508
Bacillota
GTG
His
>WENV180794417
ODIZ01000483
183994
Bacillota
TCT
Arg
>WENV180794658
ODIZ01003193
231532
Bacillota
ACG
Arg
>WENV180795069
ODIZ01022452
289717
Bacillota
CTT
Lys
>WENV180795041
ODIZ01018819
289717
Bacillota
CTT
Lys
>WENV180794865
ODIZ01008395
289717
Bacillota
CTT
Lys
>WENV180794530
ODIZ01001213
405874
Bacillota
TTC
Glu
>WENV180794769
ODIZ01005506
20932
Bacillota
GCT
Ser
>WENV180794412
ODIZ01000462
20932
Bacillota
GCT
Ser
>WENV180795120
ODIZ01031656
20932
Bacillota
GCT
Ser
>WENV180794901
ODIZ01009259
283622
Bacillota
CTT
Lys
>WENV180794849
ODIZ01007502
482593
Bacillota
CCC
Gly
>WENV180795390
ODIZ01162781
339995
Bacillota
TGC
Ala
>WENV180795295
ODIZ01094953
339995
Bacillota
TGC
Ala
>WENV180795237
ODIZ01059480
339995
Bacillota
TGC
Ala
>WENV180795108
ODIZ01029459
339995
Bacillota
TGC
Ala
>WENV180795358
ODIZ01129846
20942
Bacillota
GGA
Ser
>WENV180795321
ODIZ01112334
20942
Bacillota
GGA
Ser
>WENV180794966
ODIZ01013015
20942
Bacillota
GGA
Ser
>WENV180794678
ODIZ01003624
20942
Bacillota
GGA
Ser
>WENV180794553
ODIZ01001424
20942
Bacillota
GGA
Ser
>WENV180795312
ODIZ01105123
100696
Bacillota
GTA
Tyr
>WENV180794531
ODIZ01001213
287643
Bacillota
TAC
Val
>WENV180794826
ODIZ01006806
452735
Bacillota
GCC
Gly
>WENV180794526
ODIZ01001213
452735
Bacillota
GCC
Gly
>WENV180795313
ODIZ01105123
187458
Bacillota
CAT
Met
>WENV180794538
ODIZ01001235
183993
Bacillota
CAT
Met
>WENV180794537
ODIZ01001235
289149
Bacillota
GGT
Thr
>WENV180794889
ODIZ01008981
184495
Bacillota
CAT
Met
>WENV180794323
ODIZ01000158
141202
Bacillota
CAA
Leu
>WENV180794885
ODIZ01008981
332181
Bacillota
TGT
Thr
>WENV180794858
ODIZ01008051
47166
Bacillota
CGA
Ser
>WENV180794194
ODIZ01000001
510876
Bacillota
GGT
Thr
>WENV180794527
ODIZ01001213
289147
Bacillota
GTT
Asn
>WENV180795346
ODIZ01126375
183957
Bacillota
CCT
Arg
>WENV180795405
ODIZ01168002
293309
Bacillota
GTT
Asn
>WENV180794778
ODIZ01005734
293309
Bacillota
GTT
Asn
>WENV180794982
ODIZ01014539
404091
Bacillota
TTG
Gln
>WENV180795381
ODIZ01155361
187364
Bacillota
CAT
Met
>WENV180794981
ODIZ01014539
289716
Bacillota
GTG
His
>WENV180795182
ODIZ01047036
455891
Bacillota
GCC
Gly
>WENV180794856
ODIZ01007788
323864
Bacillota
TGC
Ala
>WENV180794432
ODIZ01000565
323864
Bacillota
TGC
Ala
>WENV180794779
ODIZ01005734
432453
Bacillota
TTC
Glu
>WENV180794736
ODIZ01004608
432453
Bacillota
TTC
Glu
>WENV180794940
ODIZ01011354
480337
Bacillota
TCC
Gly
>WENV180795096
ODIZ01027138
301649
Bacillota
TTT
Lys
>WENV180794478
ODIZ01000865
119459
Bacillota
TAG
Leu
>WENV180794474
ODIZ01000812
119459
Bacillota
TAG
Leu
>WENV180794581
ODIZ01001710
333281
Bacillota
GTT
Asn
>WENV180795407
ODIZ01168923
280547
Bacillota
GTC
Asp
>WENV180795225
ODIZ01057593
280547
Bacillota
GTC
Asp
>WENV180795109
ODIZ01029460
280547
Bacillota
GTC
Asp
>WENV180795417
ODIZ01176043
445407
Bacillota
GCC
Gly
>WENV180795227
ODIZ01057593
445407
Bacillota
GCC
Gly
>WENV180794556
ODIZ01001485
445407
Bacillota
GCC
Gly
>WENV180794456
ODIZ01000749
289154
Bacillota
CTT
Lys
>WENV180795263
ODIZ01072095
289761
Bacillota
TTT
Lys
>WENV180795035
ODIZ01018222
25955
Bacillota
GCT
Ser
>WENV180794931
ODIZ01010773
283367
Bacillota
GCC
Gly
>WENV180795004
ODIZ01015759
283367
Bacillota
GCC
Gly
>WENV180794780
ODIZ01005734
289715
Bacillota
TAC
Val
>WENV180794737
ODIZ01004608
289715
Bacillota
TAC
Val
>WENV180795406
ODIZ01168816
20943
Bacillota
CGA
Ser
>WENV180794359
ODIZ01000272
20943
Bacillota
CGA
Ser
>WENV180794709
ODIZ01004090
141141
Bacillota
GTA
Tyr
>WENV180794939
ODIZ01011354
208539
Bacillota
TGG
Pro
>WENV180794415
ODIZ01000483
208539
Bacillota
TGG
Pro
>WENV180794941
ODIZ01011354
184539
Bacillota
TCT
Arg
>WENV180794494
ODIZ01001038
183995
Bacillota
GGG
Pro
>WENV180795360
ODIZ01131392
100945
Bacillota
CAG
Leu
>WENV180794694
ODIZ01003879
403766
Bacillota
TTG
Gln
>WENV180794827
ODIZ01006806
489283
Bacillota
GCA
Cys
>WENV180795140
ODIZ01034774
280486
Bacillota
TGC
Ala
>WENV180794869
ODIZ01008539
280486
Bacillota
TGC
Ala
>WENV180795054
ODIZ01020761
280486
Bacillota
TGC
Ala
>WENV180795274
ODIZ01077749
289124
Bacillota
GTT
Asn
>WENV180795357
ODIZ01129683
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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