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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180809301
ODJK01010849
178269
Campylobacterota
CAT
Met
>WENV180810306
ODJK01210701
117865
Campylobacterota
GTA
Tyr
>WENV180809118
ODJK01004793
302166
Campylobacterota
CCA
Trp
>WENV180809225
ODJK01007817
302166
Campylobacterota
CCA
Trp
>WENV180809117
ODJK01004793
399077
Campylobacterota
GGT
Thr
>WENV180809390
ODJK01014907
399077
Campylobacterota
GGT
Thr
>WENV180810357
ODJK01242289
399077
Campylobacterota
GGT
Thr
>WENV180808992
ODJK01002660
184068
Campylobacterota
CCT
Arg
>WENV180810118
ODJK01119876
187648
Campylobacterota
TCT
Arg
>WENV180809362
ODJK01014041
354981
Campylobacterota
TTT
Lys
>WENV180809869
ODJK01062484
480432
Campylobacterota
GCA
Cys
>WENV180808906
ODJK01001785
73089
Campylobacterota
CAA
Leu
>WENV180810116
ODJK01119876
197122
Campylobacterota
GTG
His
>WENV180809580
ODJK01026218
280932
Campylobacterota
TTT
Lys
>WENV180810119
ODJK01119876
122063
Campylobacterota
TAG
Leu
>WENV180810117
ODJK01119876
235736
Campylobacterota
TCG
Arg
>WENV180809281
ODJK01009873
176586
Campylobacterota
CAT
Met
>WENV180809434
ODJK01017293
289226
Campylobacterota
GAC
Val
>WENV180809458
ODJK01018833
289226
Campylobacterota
GAC
Val
>WENV180808965
ODJK01002303
30564
Campylobacterota
TGA
Ser
>WENV180809363
ODJK01014041
289228
Campylobacterota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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