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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180821415
ODJS01008820
184065
Actinomycetota
TGG
Pro
>WENV180821983
ODJS01186949
284890
Actinomycetota
CTT
Lys
>WENV180821203
ODJS01001795
284889
Actinomycetota
CTC
Glu
>WENV180821502
ODJS01012837
184493
Actinomycetota
GGG
Pro
>WENV180821886
ODJS01102966
443526
Actinomycetota
CAC
Val
>WENV180821667
ODJS01032743
285880
Actinomycetota
TCT
Arg
>WENV180821498
ODJS01012567
292656
Actinomycetota
ACG
Arg
>WENV180821898
ODJS01108732
180944
Actinomycetota
GTC
Asp
>WENV180821488
ODJS01012126
507958
Actinomycetota
CCC
Gly
>WENV180821893
ODJS01107480
287251
Actinomycetota
CTT
Lys
>WENV180821314
ODJS01004099
180071
Actinomycetota
CAT
Met
>WENV180821315
ODJS01004099
180071
Actinomycetota
CAT
Met
>WENV180821540
ODJS01016352
221845
Actinomycetota
GAT
Ile
>WENV180821600
ODJS01023678
481756
Actinomycetota
TCC
Gly
>WENV180821279
ODJS01003295
290430
Actinomycetota
TCT
Arg
>WENV180821511
ODJS01013074
285877
Actinomycetota
CCG
Arg
>WENV180821250
ODJS01002604
187640
Actinomycetota
TGT
Thr
>WENV180821944
ODJS01144468
180945
Actinomycetota
CAT
Met
>WENV180821574
ODJS01021140
284887
Actinomycetota
GCC
Gly
>WENV180821591
ODJS01022017
292678
Actinomycetota
CTT
Lys
>WENV180821914
ODJS01120060
280979
Actinomycetota
GGT
Thr
>WENV180821824
ODJS01070725
371116
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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