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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180853564
ODKW01194385
183770
Fusobacteriota
GAT
Ile
>WENV180852968
ODKW01014783
187804
Fusobacteriota
GTC
Asp
>WENV180852975
ODKW01014783
187804
Fusobacteriota
GTC
Asp
>WENV180853573
ODKW01196255
141145
Fusobacteriota
>WENV180852967
ODKW01014783
288879
Fusobacteriota
TAC
Val
>WENV180852974
ODKW01014783
288879
Fusobacteriota
TAC
Val
>WENV180852873
ODKW01009083
119283
Fusobacteriota
GTA
Tyr
>WENV180852798
ODKW01006374
289706
Fusobacteriota
GTG
His
>WENV180852573
ODKW01002014
280538
Fusobacteriota
TTT
Lys
>WENV180853010
ODKW01017590
280538
Fusobacteriota
TTT
Lys
>WENV180853466
ODKW01126554
184485
Fusobacteriota
GTC
Asp
>WENV180852800
ODKW01006374
184487
Fusobacteriota
TCT
Arg
>WENV180852696
ODKW01003701
183767
Fusobacteriota
TGC
Ala
>WENV180852575
ODKW01002014
156979
Fusobacteriota
CAT
Met
>WENV180852570
ODKW01002014
57899
Fusobacteriota
TAA
Leu
>WENV180853588
ODKW01199923
288877
Fusobacteriota
GTT
Asn
>WENV180852799
ODKW01006374
292724
Fusobacteriota
TTT
Lys
>WENV180853591
ODKW01202420
407549
Fusobacteriota
TTC
Glu
>WENV180852973
ODKW01014783
407549
Fusobacteriota
TTC
Glu
>WENV180853082
ODKW01026492
288878
Fusobacteriota
TGT
Thr
>WENV180852976
ODKW01014783
288878
Fusobacteriota
TGT
Thr
>WENV180853465
ODKW01126554
289739
Fusobacteriota
TAC
Val
>WENV180852817
ODKW01006952
289708
Fusobacteriota
TGT
Thr
>WENV180852574
ODKW01002014
183769
Fusobacteriota
TCT
Arg
>WENV180852970
ODKW01014783
484173
Fusobacteriota
GCA
Cys
>WENV180853009
ODKW01017590
288876
Fusobacteriota
GTG
His
>WENV180852739
ODKW01004797
183773
Fusobacteriota
CCT
Arg
>WENV180852658
ODKW01003179
74687
Fusobacteriota
CAA
Leu
>WENV180852657
ODKW01003179
183772
Fusobacteriota
ACG
Arg
>WENV180853007
ODKW01017590
202720
Fusobacteriota
TGG
Pro
>WENV180852734
ODKW01004656
202720
Fusobacteriota
TGG
Pro
>WENV180853011
ODKW01017590
141384
Fusobacteriota
TAG
Leu
>WENV180852977
ODKW01014783
141384
Fusobacteriota
TAG
Leu
>WENV180852571
ODKW01002014
183768
Fusobacteriota
CAT
Met
>WENV180852697
ODKW01003701
192090
Fusobacteriota
CAT
Met
>WENV180852972
ODKW01014783
288880
Fusobacteriota
CTT
Lys
>WENV180852519
ODKW01001628
47168
Fusobacteriota
GCT
Ser
>WENV180853166
ODKW01035748
404073
Fusobacteriota
TTG
Gln
>WENV180853599
ODKW01211872
403662
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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