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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180859078
ODLD01000007
109178
Gammaproteobacteria
CAA
Leu
>WENV180859112
ODLD01000021
5699
Gammaproteobacteria
GCT
Ser
>WENV180859338
ODLD01000373
176446
Gammaproteobacteria
CAT
Met
>WENV180859410
ODLD01000637
176446
Gammaproteobacteria
CAT
Met
>WENV180859194
ODLD01000068
178974
Gammaproteobacteria
GAC
Val
>WENV180859533
ODLD01001136
178974
Gammaproteobacteria
GAC
Val
>WENV180859378
ODLD01000517
127466
Gammaproteobacteria
TAG
Leu
>WENV180859097
ODLD01000014
31109
Gammaproteobacteria
GGA
Ser
>WENV180859253
ODLD01000146
4148
Gammaproteobacteria
>WENV180859583
ODLD01001635
4148
Gammaproteobacteria
>WENV180859285
ODLD01000217
178975
Gammaproteobacteria
CTT
Lys
>WENV180859722
ODLD01002999
178975
Gammaproteobacteria
CTT
Lys
>WENV180859108
ODLD01000019
401175
Gammaproteobacteria
TTG
Gln
>WENV180859109
ODLD01000019
401175
Gammaproteobacteria
TTG
Gln
>WENV180859379
ODLD01000517
401175
Gammaproteobacteria
TTG
Gln
>WENV180859380
ODLD01000517
401175
Gammaproteobacteria
TTG
Gln
>WENV180859111
ODLD01000021
4023
Gammaproteobacteria
>WENV180859375
ODLD01000510
238652
Gammaproteobacteria
CAT
Met
>WENV180859468
ODLD01000789
238652
Gammaproteobacteria
CAT
Met
>WENV180859703
ODLD01002705
238652
Gammaproteobacteria
CAT
Met
>WENV180859728
ODLD01003071
238652
Gammaproteobacteria
CAT
Met
>WENV180859374
ODLD01000507
29761
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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