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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180894961
ODMS01001199
283336
Actinomycetota
GGT
Thr
>WENV180894990
ODMS01008646
280978
Actinomycetota
CGT
Thr
>WENV180894960
ODMS01001199
118279
Actinomycetota
GTA
Tyr
>WENV180894970
ODMS01001582
178581
Actinomycetota
TAC
Val
>WENV180894975
ODMS01002415
400421
Actinomycetota
GAC
Val
>WENV180894967
ODMS01001403
283331
Actinomycetota
CTC
Glu
>WENV180894962
ODMS01001199
399203
Actinomycetota
CAT
Met
>WENV180894944
ODMS01000316
178580
Actinomycetota
GAA
Phe
>WENV180894987
ODMS01007775
215051
Actinomycetota
GGG
Pro
>WENV180894943
ODMS01000316
178579
Actinomycetota
GTC
Asp
>WENV180894952
ODMS01000553
283329
Actinomycetota
GTG
His
>WENV180894972
ODMS01001721
283327
Actinomycetota
TGC
Ala
>WENV180894979
ODMS01002917
283335
Actinomycetota
CTT
Lys
>WENV180894968
ODMS01001408
100161
Actinomycetota
CAG
Leu
>WENV180894978
ODMS01002634
300986
Actinomycetota
ACG
Arg
>WENV180894939
ODMS01000063
56387
Actinomycetota
CGA
Ser
>WENV180894992
ODMS01009597
197533
Actinomycetota
CAT
Met
>WENV180894953
ODMS01000587
178582
Actinomycetota
TTT
Lys
>WENV180894966
ODMS01001403
400420
Actinomycetota
CTG
Gln
>WENV180894942
ODMS01000219
283322
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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