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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180912885
ODSP01000339
283336
Actinomycetota
GGT
Thr
>WENV180912886
ODSP01000339
399203
Actinomycetota
CAT
Met
>WENV180912911
ODSP01006701
336201
Actinomycetota
TGT
Thr
>WENV180912908
ODSP01005329
281146
Actinomycetota
CGC
Ala
>WENV180912907
ODSP01004973
117851
Actinomycetota
GTA
Tyr
>WENV180912902
ODSP01003073
400674
Actinomycetota
CTG
Gln
>WENV180912899
ODSP01002617
312253
Actinomycetota
TGC
Ala
>WENV180912898
ODSP01002163
283329
Actinomycetota
GTG
His
>WENV180912890
ODSP01001081
100161
Actinomycetota
CAG
Leu
>WENV180912903
ODSP01003436
197533
Actinomycetota
CAT
Met
>WENV180912904
ODSP01003499
421837
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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