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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180928662
ODTM01146964
178269
Campylobacterota
CAT
Met
>WENV180928525
ODTM01072887
178268
Campylobacterota
TCG
Arg
>WENV180928571
ODTM01092885
302166
Campylobacterota
CCA
Trp
>WENV180928558
ODTM01084749
399077
Campylobacterota
GGT
Thr
>WENV180928726
ODTM01197892
184068
Campylobacterota
CCT
Arg
>WENV180928372
ODTM01038436
480432
Campylobacterota
GCA
Cys
>WENV180928641
ODTM01131729
118352
Campylobacterota
GTA
Tyr
>WENV180928517
ODTM01070115
73089
Campylobacterota
CAA
Leu
>WENV180928524
ODTM01072887
197122
Campylobacterota
GTG
His
>WENV180928452
ODTM01051855
280932
Campylobacterota
TTT
Lys
>WENV180928523
ODTM01072887
156335
Campylobacterota
TGG
Pro
>WENV180928313
ODTM01032474
289226
Campylobacterota
GAC
Val
>WENV180928373
ODTM01038436
30564
Campylobacterota
TGA
Ser
>WENV180928453
ODTM01051855
289228
Campylobacterota
CTC
Glu
>WENV180928670
ODTM01151943
403821
Campylobacterota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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