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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180936923
ODTV01001966
109178
Gammaproteobacteria
CAA
Leu
>WENV180936862
ODTV01000356
86464
Gammaproteobacteria
TAA
Leu
>WENV180936921
ODTV01001888
86464
Gammaproteobacteria
TAA
Leu
>WENV180937037
ODTV01005720
86464
Gammaproteobacteria
TAA
Leu
>WENV180936943
ODTV01002513
4116
Gammaproteobacteria
GCT
Ser
>WENV180936961
ODTV01003155
5699
Gammaproteobacteria
GCT
Ser
>WENV180936825
ODTV01000067
121754
Gammaproteobacteria
TAG
Leu
>WENV180936903
ODTV01001102
482476
Gammaproteobacteria
CCA
Trp
>WENV180936855
ODTV01000223
31109
Gammaproteobacteria
GGA
Ser
>WENV180937437
ODTV01152059
401175
Gammaproteobacteria
TTG
Gln
>WENV180936908
ODTV01001257
401175
Gammaproteobacteria
TTG
Gln
>WENV180936827
ODTV01000067
401175
Gammaproteobacteria
TTG
Gln
>WENV180936826
ODTV01000067
401175
Gammaproteobacteria
TTG
Gln
>WENV180937297
ODTV01054869
293263
Gammaproteobacteria
CTT
Lys
>WENV180937230
ODTV01032926
4023
Gammaproteobacteria
>WENV180937051
ODTV01006490
4023
Gammaproteobacteria
>WENV180937205
ODTV01026880
73129
Gammaproteobacteria
TAA
Leu
>WENV180937200
ODTV01026243
100226
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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