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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180965437
ODUP01001159
295385
Bacteroidota
CCA
Trp
>WENV180965314
ODUP01000376
285360
Bacteroidota
TTT
Lys
>WENV180965442
ODUP01001194
117741
Bacteroidota
TAG
Leu
>WENV180965177
ODUP01000056
398829
Bacteroidota
CCT
Arg
>WENV180965529
ODUP01002047
175838
Bacteroidota
GTT
Asn
>WENV180965530
ODUP01002047
175838
Bacteroidota
GTT
Asn
>WENV180965779
ODUP01008570
175904
Bacteroidota
CGG
Pro
>WENV180965731
ODUP01005730
289031
Bacteroidota
CAT
Met
>WENV180965526
ODUP01002005
289031
Bacteroidota
CAT
Met
>WENV180965388
ODUP01000823
280553
Bacteroidota
TTT
Lys
>WENV180965774
ODUP01008204
280557
Bacteroidota
CAT
Met
>WENV180965209
ODUP01000108
280557
Bacteroidota
CAT
Met
>WENV180965140
ODUP01000019
20206
Bacteroidota
GGA
Ser
>WENV180966090
ODUP01054387
483416
Bacteroidota
CTG
Gln
>WENV180965934
ODUP01021041
398871
Bacteroidota
TTC
Glu
>WENV180965172
ODUP01000050
201819
Bacteroidota
CAT
Met
>WENV180966345
ODUP01217100
56493
Bacteroidota
TGA
Ser
>WENV180965158
ODUP01000030
56493
Bacteroidota
TGA
Ser
>WENV180965975
ODUP01028165
175906
Bacteroidota
GTG
His
>WENV180965156
ODUP01000029
175903
Bacteroidota
GTG
His
>WENV180965897
ODUP01017017
118089
Bacteroidota
TAG
Leu
>WENV180966353
ODUP01217418
398872
Bacteroidota
GGT
Thr
>WENV180965780
ODUP01008570
280530
Bacteroidota
CCA
Trp
>WENV180965508
ODUP01001889
175936
Bacteroidota
CAT
Met
>WENV180965914
ODUP01018641
203954
Bacteroidota
GTC
Asp
>WENV180965947
ODUP01023262
178907
Bacteroidota
TCT
Arg
>WENV180965948
ODUP01023311
405877
Bacteroidota
GGT
Thr
>WENV180965329
ODUP01000425
29791
Bacteroidota
GCT
Ser
>WENV180965786
ODUP01008985
20449
Bacteroidota
GGA
Ser
>WENV180965884
ODUP01015248
21127
Bacteroidota
GGA
Ser
>WENV180965196
ODUP01000085
56072
Bacteroidota
TAA
Leu
>WENV180966358
ODUP01219050
57807
Bacteroidota
TGA
Ser
>WENV180965375
ODUP01000746
57807
Bacteroidota
TGA
Ser
>WENV180965263
ODUP01000211
57807
Bacteroidota
TGA
Ser
>WENV180965157
ODUP01000030
57807
Bacteroidota
TGA
Ser
>WENV180965210
ODUP01000113
175902
Bacteroidota
GGC
Ala
>WENV180965826
ODUP01010941
398860
Bacteroidota
CTC
Glu
>WENV180965330
ODUP01000425
398860
Bacteroidota
CTC
Glu
>WENV180965379
ODUP01000754
480404
Bacteroidota
TTG
Gln
>WENV180965971
ODUP01027784
280451
Bacteroidota
CGT
Thr
>WENV180966354
ODUP01218063
99847
Bacteroidota
GTA
Tyr
>WENV180966044
ODUP01040570
99847
Bacteroidota
GTA
Tyr
>WENV180965220
ODUP01000130
99847
Bacteroidota
GTA
Tyr
>WENV180965957
ODUP01025622
399200
Bacteroidota
CAT
Met
>WENV180966038
ODUP01039426
186874
Bacteroidota
CAT
Met
>WENV180965813
ODUP01010273
186874
Bacteroidota
CAT
Met
>WENV180965139
ODUP01000019
488746
Bacteroidota
CTG
Gln
>WENV180965758
ODUP01007036
399026
Bacteroidota
CCT
Arg
>WENV180966339
ODUP01216817
280478
Bacteroidota
GCC
Gly
>WENV180965564
ODUP01002474
20766
Bacteroidota
GGA
Ser
>WENV180966348
ODUP01217274
186108
Bacteroidota
GTT
Asn
>WENV180965494
ODUP01001744
175844
Bacteroidota
GGC
Ala
>WENV180966074
ODUP01048717
73011
Bacteroidota
CAA
Leu
>WENV180965620
ODUP01003194
480318
Bacteroidota
CTG
Gln
>WENV180965138
ODUP01000019
158068
Bacteroidota
GGG
Pro
>WENV180965950
ODUP01024302
186142
Bacteroidota
GAT
Ile
>WENV180965407
ODUP01000862
398828
Bacteroidota
CCG
Arg
>WENV180966340
ODUP01216817
74084
Bacteroidota
CAG
Leu
>WENV180965539
ODUP01002127
159415
Bacteroidota
TAC
Val
>WENV180965708
ODUP01005106
480325
Bacteroidota
CTG
Gln
>WENV180966341
ODUP01216929
140771
Bacteroidota
>WENV180965563
ODUP01002459
176192
Bacteroidota
TCT
Arg
>WENV180966190
ODUP01096768
400088
Bacteroidota
GGT
Thr
>WENV180966175
ODUP01090598
280446
Bacteroidota
TTT
Lys
>WENV180965451
ODUP01001268
280446
Bacteroidota
TTT
Lys
>WENV180965159
ODUP01000031
280446
Bacteroidota
TTT
Lys
>WENV180965411
ODUP01000899
484496
Bacteroidota
TTG
Gln
>WENV180965271
ODUP01000228
484496
Bacteroidota
TTG
Gln
>WENV180966145
ODUP01074422
285750
Bacteroidota
CCC
Gly
>WENV180965534
ODUP01002088
117804
Bacteroidota
TAG
Leu
>WENV180965951
ODUP01024302
186143
Bacteroidota
TGC
Ala
>WENV180966067
ODUP01045801
398836
Bacteroidota
GCA
Cys
>WENV180965829
ODUP01011054
398836
Bacteroidota
GCA
Cys
>WENV180965313
ODUP01000375
398836
Bacteroidota
GCA
Cys
>WENV180965285
ODUP01000279
398836
Bacteroidota
GCA
Cys
>WENV180965350
ODUP01000537
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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