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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181002114
ODVX01000023
109178
Gammaproteobacteria
CAA
Leu
>WENV181003577
ODVX01018142
284044
Gammaproteobacteria
TTC
Glu
>WENV181004348
ODVX01249900
284044
Gammaproteobacteria
TTC
Glu
>WENV181002579
ODVX01000759
5699
Gammaproteobacteria
GCT
Ser
>WENV181002849
ODVX01002136
176446
Gammaproteobacteria
CAT
Met
>WENV181003028
ODVX01003755
176446
Gammaproteobacteria
CAT
Met
>WENV181003461
ODVX01013719
451238
Gammaproteobacteria
GCC
Gly
>WENV181002472
ODVX01000458
178974
Gammaproteobacteria
GAC
Val
>WENV181002657
ODVX01001100
178974
Gammaproteobacteria
GAC
Val
>WENV181003310
ODVX01008712
178974
Gammaproteobacteria
GAC
Val
>WENV181002778
ODVX01001707
127466
Gammaproteobacteria
TAG
Leu
>WENV181002971
ODVX01003041
127466
Gammaproteobacteria
TAG
Leu
>WENV181002056
ODVX01000007
31109
Gammaproteobacteria
GGA
Ser
>WENV181003007
ODVX01003484
4148
Gammaproteobacteria
>WENV181003224
ODVX01006884
4148
Gammaproteobacteria
>WENV181003181
ODVX01006392
100171
Gammaproteobacteria
GAG
Leu
>WENV181003724
ODVX01027610
178975
Gammaproteobacteria
CTT
Lys
>WENV181003001
ODVX01003435
178975
Gammaproteobacteria
CTT
Lys
>WENV181002101
ODVX01000018
401175
Gammaproteobacteria
TTG
Gln
>WENV181002102
ODVX01000018
401175
Gammaproteobacteria
TTG
Gln
>WENV181002779
ODVX01001707
401175
Gammaproteobacteria
TTG
Gln
>WENV181004352
ODVX01250181
401175
Gammaproteobacteria
TTG
Gln
>WENV181003034
ODVX01003810
4023
Gammaproteobacteria
>WENV181002620
ODVX01000882
238652
Gammaproteobacteria
CAT
Met
>WENV181002774
ODVX01001657
238652
Gammaproteobacteria
CAT
Met
>WENV181002913
ODVX01002692
238652
Gammaproteobacteria
CAT
Met
>WENV181003059
ODVX01004244
238652
Gammaproteobacteria
CAT
Met
>WENV181002984
ODVX01003172
43194
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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