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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181010735
ODWI01000054
118433
Bacteroidota
TAG
Leu
>WENV181010746
ODWI01000066
400161
Bacteroidota
GGT
Thr
>WENV181011778
ODWI01126473
179467
Bacteroidota
TGT
Thr
>WENV181010781
ODWI01000160
282852
Bacteroidota
TTT
Lys
>WENV181010734
ODWI01000051
481329
Bacteroidota
>WENV181010771
ODWI01000125
400949
Bacteroidota
CCT
Arg
>WENV181011264
ODWI01015504
201819
Bacteroidota
CAT
Met
>WENV181010856
ODWI01000411
481267
Bacteroidota
CTG
Gln
>WENV181011735
ODWI01105846
179464
Bacteroidota
CAT
Met
>WENV181011866
ODWI01180665
348707
Bacteroidota
TTT
Lys
>WENV181011506
ODWI01039191
178571
Bacteroidota
GTT
Asn
>WENV181011048
ODWI01004045
178571
Bacteroidota
GTT
Asn
>WENV181010717
ODWI01000033
178571
Bacteroidota
GTT
Asn
>WENV181010704
ODWI01000015
178571
Bacteroidota
GTT
Asn
>WENV181011420
ODWI01030593
157895
Bacteroidota
TAC
Val
>WENV181010775
ODWI01000131
178572
Bacteroidota
CAT
Met
>WENV181010693
ODWI01000011
178572
Bacteroidota
CAT
Met
>WENV181011883
ODWI01190190
172085
Bacteroidota
TAC
Val
>WENV181011507
ODWI01039525
172085
Bacteroidota
TAC
Val
>WENV181011098
ODWI01005083
172085
Bacteroidota
TAC
Val
>WENV181010759
ODWI01000082
172085
Bacteroidota
TAC
Val
>WENV181010751
ODWI01000072
172085
Bacteroidota
TAC
Val
>WENV181010737
ODWI01000054
172085
Bacteroidota
TAC
Val
>WENV181010736
ODWI01000054
172085
Bacteroidota
TAC
Val
>WENV181010801
ODWI01000211
56385
Bacteroidota
TGA
Ser
>WENV181010740
ODWI01000056
431429
Bacteroidota
CCT
Arg
>WENV181010819
ODWI01000279
312035
Bacteroidota
CCA
Trp
>WENV181010747
ODWI01000066
312035
Bacteroidota
CCA
Trp
>WENV181011879
ODWI01189707
242241
Bacteroidota
GTC
Asp
>WENV181011131
ODWI01006544
242241
Bacteroidota
GTC
Asp
>WENV181011116
ODWI01005916
242241
Bacteroidota
GTC
Asp
>WENV181011022
ODWI01003297
242241
Bacteroidota
GTC
Asp
>WENV181010971
ODWI01001938
242241
Bacteroidota
GTC
Asp
>WENV181010816
ODWI01000257
404663
Bacteroidota
GGT
Thr
>WENV181011756
ODWI01115144
400850
Bacteroidota
TTC
Glu
>WENV181010897
ODWI01000828
175886
Bacteroidota
GGC
Ala
>WENV181010757
ODWI01000082
283315
Bacteroidota
CGT
Thr
>WENV181010703
ODWI01000015
400815
Bacteroidota
TTC
Glu
>WENV181010675
ODWI01000006
20533
Bacteroidota
GGA
Ser
>WENV181011867
ODWI01181081
404109
Bacteroidota
CTC
Glu
>WENV181011824
ODWI01157498
47445
Bacteroidota
TAA
Leu
>WENV181010694
ODWI01000011
156383
Bacteroidota
GGG
Pro
>WENV181010881
ODWI01000655
115044
Bacteroidota
GTA
Tyr
>WENV181010984
ODWI01002212
46648
Bacteroidota
TAA
Leu
>WENV181010766
ODWI01000085
46648
Bacteroidota
TAA
Leu
>WENV181010763
ODWI01000082
118432
Bacteroidota
CAG
Leu
>WENV181010895
ODWI01000806
280478
Bacteroidota
GCC
Gly
>WENV181010844
ODWI01000395
284236
Bacteroidota
CGG
Pro
>WENV181011431
ODWI01031292
187400
Bacteroidota
GTT
Asn
>WENV181011003
ODWI01002862
228511
Bacteroidota
GAT
Ile
>WENV181010943
ODWI01001396
284457
Bacteroidota
CAT
Met
>WENV181010795
ODWI01000188
284457
Bacteroidota
CAT
Met
>WENV181010817
ODWI01000257
372845
Bacteroidota
CCA
Trp
>WENV181011766
ODWI01117950
178134
Bacteroidota
TGG
Pro
>WENV181010859
ODWI01000433
178134
Bacteroidota
TGG
Pro
>WENV181010949
ODWI01001532
331443
Bacteroidota
CGT
Thr
>WENV181011880
ODWI01189710
118220
Bacteroidota
GTA
Tyr
>WENV181010760
ODWI01000082
118220
Bacteroidota
GTA
Tyr
>WENV181010752
ODWI01000072
118220
Bacteroidota
GTA
Tyr
>WENV181010745
ODWI01000066
118220
Bacteroidota
GTA
Tyr
>WENV181011761
ODWI01116380
284313
Bacteroidota
TTT
Lys
>WENV181010821
ODWI01000287
481044
Bacteroidota
>WENV181010750
ODWI01000071
179653
Bacteroidota
GTG
His
>WENV181010748
ODWI01000067
481328
Bacteroidota
TTG
Gln
>WENV181010902
ODWI01000913
285750
Bacteroidota
CCC
Gly
>WENV181010743
ODWI01000061
284456
Bacteroidota
CGG
Pro
>WENV181011102
ODWI01005245
73509
Bacteroidota
GAG
Leu
>WENV181010862
ODWI01000433
73509
Bacteroidota
GAG
Leu
>WENV181010764
ODWI01000082
73509
Bacteroidota
GAG
Leu
>WENV181010758
ODWI01000082
481045
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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