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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181034259
ODXN01154340
183770
Fusobacteriota
GAT
Ile
>WENV181033643
ODXN01016250
187804
Fusobacteriota
GTC
Asp
>WENV181033650
ODXN01016250
187804
Fusobacteriota
GTC
Asp
>WENV181034271
ODXN01157710
141145
Fusobacteriota
>WENV181033642
ODXN01016250
288879
Fusobacteriota
TAC
Val
>WENV181033649
ODXN01016250
288879
Fusobacteriota
TAC
Val
>WENV181033252
ODXN01003860
119283
Fusobacteriota
GTA
Tyr
>WENV181032537
ODXN01000132
289706
Fusobacteriota
GTG
His
>WENV181033167
ODXN01003290
280538
Fusobacteriota
TTT
Lys
>WENV181033823
ODXN01030902
280538
Fusobacteriota
TTT
Lys
>WENV181033950
ODXN01042418
280538
Fusobacteriota
TTT
Lys
>WENV181032410
ODXN01000013
184485
Fusobacteriota
GTC
Asp
>WENV181032832
ODXN01000769
184485
Fusobacteriota
GTC
Asp
>WENV181033223
ODXN01003716
184485
Fusobacteriota
GTC
Asp
>WENV181033473
ODXN01008756
184485
Fusobacteriota
GTC
Asp
>WENV181033523
ODXN01010422
184487
Fusobacteriota
TCT
Arg
>WENV181032879
ODXN01001065
184487
Fusobacteriota
TCT
Arg
>WENV181033350
ODXN01005626
183767
Fusobacteriota
TGC
Ala
>WENV181033825
ODXN01030902
156979
Fusobacteriota
CAT
Met
>WENV181033820
ODXN01030902
57899
Fusobacteriota
TAA
Leu
>WENV181033168
ODXN01003290
143640
Fusobacteriota
TAG
Leu
>WENV181033951
ODXN01042418
143640
Fusobacteriota
TAG
Leu
>WENV181034273
ODXN01158625
143640
Fusobacteriota
TAG
Leu
>WENV181034262
ODXN01155143
196958
Fusobacteriota
GAT
Ile
>WENV181032538
ODXN01000132
289707
Fusobacteriota
TTT
Lys
>WENV181034307
ODXN01183319
292614
Fusobacteriota
TGC
Ala
>WENV181033323
ODXN01005143
187240
Fusobacteriota
TCG
Arg
>WENV181034244
ODXN01140369
288877
Fusobacteriota
GTT
Asn
>WENV181033918
ODXN01040136
288877
Fusobacteriota
GTT
Asn
>WENV181033914
ODXN01039219
288877
Fusobacteriota
GTT
Asn
>WENV181033842
ODXN01031680
288877
Fusobacteriota
GTT
Asn
>WENV181032878
ODXN01001065
292724
Fusobacteriota
TTT
Lys
>WENV181034274
ODXN01158636
407549
Fusobacteriota
TTC
Glu
>WENV181033648
ODXN01016250
407549
Fusobacteriota
TTC
Glu
>WENV181033251
ODXN01003860
407549
Fusobacteriota
TTC
Glu
>WENV181033250
ODXN01003860
288878
Fusobacteriota
TGT
Thr
>WENV181033651
ODXN01016250
288878
Fusobacteriota
TGT
Thr
>WENV181033821
ODXN01030902
214188
Fusobacteriota
CAT
Met
>WENV181033472
ODXN01008756
289739
Fusobacteriota
TAC
Val
>WENV181033222
ODXN01003716
289739
Fusobacteriota
TAC
Val
>WENV181032831
ODXN01000769
289739
Fusobacteriota
TAC
Val
>WENV181032409
ODXN01000013
289739
Fusobacteriota
TAC
Val
>WENV181033474
ODXN01008756
289708
Fusobacteriota
TGT
Thr
>WENV181032744
ODXN01000533
289708
Fusobacteriota
TGT
Thr
>WENV181033824
ODXN01030902
183769
Fusobacteriota
TCT
Arg
>WENV181033645
ODXN01016250
484173
Fusobacteriota
GCA
Cys
>WENV181033017
ODXN01001901
74687
Fusobacteriota
CAA
Leu
>WENV181033016
ODXN01001901
183772
Fusobacteriota
ACG
Arg
>WENV181034181
ODXN01104930
202720
Fusobacteriota
TGG
Pro
>WENV181033352
ODXN01005626
202720
Fusobacteriota
TGG
Pro
>WENV181033351
ODXN01005626
192090
Fusobacteriota
CAT
Met
>WENV181033647
ODXN01016250
288880
Fusobacteriota
CTT
Lys
>WENV181033068
ODXN01002280
47168
Fusobacteriota
GCT
Ser
>WENV181032929
ODXN01001332
404073
Fusobacteriota
TTG
Gln
>WENV181032620
ODXN01000241
404073
Fusobacteriota
TTG
Gln
>WENV181034318
ODXN01184862
403662
Fusobacteriota
TTC
Glu
>WENV181033978
ODXN01047550
228619
Fusobacteriota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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