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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181034991
ODXO01007644
99852
Bacillota
GTA
Tyr
>WENV181035439
ODXO01045115
343590
Bacillota
GCC
Gly
>WENV181035375
ODXO01035737
280500
Bacillota
TGC
Ala
>WENV181035397
ODXO01038457
280500
Bacillota
TGC
Ala
>WENV181035523
ODXO01067305
405363
Bacillota
GCA
Cys
>WENV181034851
ODXO01003963
280428
Bacillota
GAA
Phe
>WENV181035206
ODXO01019486
280428
Bacillota
GAA
Phe
>WENV181035349
ODXO01032016
280428
Bacillota
GAA
Phe
>WENV181035510
ODXO01060500
280428
Bacillota
GAA
Phe
>WENV181035544
ODXO01073561
280428
Bacillota
GAA
Phe
>WENV181035734
ODXO01191592
280428
Bacillota
GAA
Phe
>WENV181034902
ODXO01005141
291579
Bacillota
GAA
Phe
>WENV181034999
ODXO01007974
229015
Bacillota
GTG
His
>WENV181035211
ODXO01019904
179917
Bacillota
CAT
Met
>WENV181034657
ODXO01000984
179917
Bacillota
CAT
Met
>WENV181034658
ODXO01000984
302145
Bacillota
GAA
Phe
>WENV181035732
ODXO01191569
280466
Bacillota
TAC
Val
>WENV181034634
ODXO01000793
280492
Bacillota
CTT
Lys
>WENV181034975
ODXO01006969
291629
Bacillota
CCA
Trp
>WENV181035016
ODXO01008329
179563
Bacillota
GAT
Ile
>WENV181035015
ODXO01008329
295166
Bacillota
TGC
Ala
>WENV181034759
ODXO01002274
190476
Bacillota
CAT
Met
>WENV181035007
ODXO01008180
73664
Bacillota
CAG
Leu
>WENV181034810
ODXO01002836
73664
Bacillota
CAG
Leu
>WENV181035003
ODXO01008118
280447
Bacillota
GAC
Val
>WENV181035261
ODXO01023772
5692
Bacillota
GCT
Ser
>WENV181034710
ODXO01001523
5692
Bacillota
GCT
Ser
>WENV181035410
ODXO01040441
186123
Bacillota
GTC
Asp
>WENV181035327
ODXO01029630
175825
Bacillota
GAT
Ile
>WENV181035230
ODXO01021354
291558
Bacillota
CTT
Lys
>WENV181035403
ODXO01039668
284723
Bacillota
TAC
Val
>WENV181035747
ODXO01193956
73009
Bacillota
CAG
Leu
>WENV181034977
ODXO01007020
73009
Bacillota
CAG
Leu
>WENV181035363
ODXO01034395
189473
Bacillota
GAT
Ile
>WENV181035374
ODXO01035634
189473
Bacillota
GAT
Ile
>WENV181035033
ODXO01008971
291581
Bacillota
CGG
Pro
>WENV181034869
ODXO01004380
175859
Bacillota
TCT
Arg
>WENV181035656
ODXO01124676
284502
Bacillota
TAC
Val
>WENV181035724
ODXO01188673
280436
Bacillota
TGC
Ala
>WENV181035372
ODXO01035588
290325
Bacillota
GCC
Gly
>WENV181035462
ODXO01048356
290325
Bacillota
GCC
Gly
>WENV181035424
ODXO01042947
175831
Bacillota
ACG
Arg
>WENV181034960
ODXO01006424
175831
Bacillota
ACG
Arg
>WENV181034998
ODXO01007974
179810
Bacillota
TCT
Arg
>WENV181035032
ODXO01008971
480322
Bacillota
CTG
Gln
>WENV181034871
ODXO01004391
480322
Bacillota
CTG
Gln
>WENV181034994
ODXO01007765
175868
Bacillota
GTT
Asn
>WENV181035465
ODXO01048742
314834
Bacillota
TGC
Ala
>WENV181035730
ODXO01191393
322848
Bacillota
CTT
Lys
>WENV181035722
ODXO01187345
322848
Bacillota
CTT
Lys
>WENV181035717
ODXO01178517
322848
Bacillota
CTT
Lys
>WENV181035090
ODXO01011603
322848
Bacillota
CTT
Lys
>WENV181034478
ODXO01000207
322848
Bacillota
CTT
Lys
>WENV181035721
ODXO01187345
398854
Bacillota
CTC
Glu
>WENV181035716
ODXO01178517
398854
Bacillota
CTC
Glu
>WENV181034817
ODXO01003137
398854
Bacillota
CTC
Glu
>WENV181034640
ODXO01000909
291576
Bacillota
CCC
Gly
>WENV181034578
ODXO01000602
480324
Bacillota
TTG
Gln
>WENV181035071
ODXO01010550
497729
Bacillota
CCA
Trp
>WENV181035042
ODXO01009304
497729
Bacillota
CCA
Trp
>WENV181034410
ODXO01000064
497729
Bacillota
CCA
Trp
>WENV181035598
ODXO01093252
175899
Bacillota
GTC
Asp
>WENV181035545
ODXO01074179
175899
Bacillota
GTC
Asp
>WENV181035336
ODXO01030661
56079
Bacillota
AAG
Leu
>WENV181034781
ODXO01002534
56079
Bacillota
AAG
Leu
>WENV181035390
ODXO01037069
332891
Bacillota
TGC
Ala
>WENV181035073
ODXO01010714
323864
Bacillota
TGC
Ala
>WENV181035123
ODXO01013592
186051
Bacillota
GAT
Ile
>WENV181035674
ODXO01138089
117745
Bacillota
GTA
Tyr
>WENV181034648
ODXO01000936
280444
Bacillota
GGT
Thr
>WENV181034645
ODXO01000936
280444
Bacillota
GGT
Thr
>WENV181035635
ODXO01111498
291597
Bacillota
TGC
Ala
>WENV181034756
ODXO01002210
46643
Bacillota
TGA
Ser
>WENV181035281
ODXO01024532
342104
Bacillota
TAC
Val
>WENV181034347
ODXO01000008
223045
Bacillota
GAT
Ile
>WENV181035135
ODXO01013977
179755
Bacillota
CCG
Arg
>WENV181035605
ODXO01095825
58120
Bacillota
AAG
Leu
>WENV181034760
ODXO01002274
398832
Bacillota
TTC
Glu
>WENV181035663
ODXO01126813
118669
Bacillota
GTA
Tyr
>WENV181034931
ODXO01005790
280462
Bacillota
GAA
Phe
>WENV181035141
ODXO01014574
398852
Bacillota
CTC
Glu
>WENV181034840
ODXO01003715
398852
Bacillota
CTC
Glu
>WENV181034729
ODXO01001833
398852
Bacillota
CTC
Glu
>WENV181034576
ODXO01000583
398852
Bacillota
CTC
Glu
>WENV181035279
ODXO01024420
289123
Bacillota
GGT
Thr
>WENV181034875
ODXO01004399
175857
Bacillota
GTG
His
>WENV181034990
ODXO01007644
398833
Bacillota
TGT
Thr
>WENV181035760
ODXO01195687
175849
Bacillota
GTC
Asp
>WENV181034853
ODXO01003963
175849
Bacillota
GTC
Asp
>WENV181034647
ODXO01000936
175849
Bacillota
GTC
Asp
>WENV181034877
ODXO01004399
280463
Bacillota
TTT
Lys
>WENV181034974
ODXO01006969
405393
Bacillota
GCC
Gly
>WENV181035260
ODXO01023772
56074
Bacillota
TGA
Ser
>WENV181034709
ODXO01001523
56074
Bacillota
TGA
Ser
>WENV181034811
ODXO01002897
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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