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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181072159
OEAN01000742
204388
Verrucomicrobiota
CAT
Met
>WENV181072288
OEAN01001406
406043
Verrucomicrobiota
GCA
Cys
>WENV181072183
OEAN01000834
293125
Verrucomicrobiota
GAA
Phe
>WENV181072409
OEAN01002781
406350
Verrucomicrobiota
TGT
Thr
>WENV181072258
OEAN01001270
148006
Verrucomicrobiota
CAA
Leu
>WENV181072297
OEAN01001485
101600
Verrucomicrobiota
AAG
Leu
>WENV181072201
OEAN01000905
293105
Verrucomicrobiota
CAT
Met
>WENV181072344
OEAN01001796
405901
Verrucomicrobiota
GCC
Gly
>WENV181072338
OEAN01001721
405901
Verrucomicrobiota
GCC
Gly
>WENV181072322
OEAN01001574
483642
Verrucomicrobiota
CCC
Gly
>WENV181072142
OEAN01000685
8960
Verrucomicrobiota
CGA
Ser
>WENV181072217
OEAN01000982
101463
Verrucomicrobiota
TAA
Leu
>WENV181072383
OEAN01002421
157427
Verrucomicrobiota
GTC
Asp
>WENV181072327
OEAN01001603
293079
Verrucomicrobiota
CGC
Ala
>WENV181072110
OEAN01000628
120352
Verrucomicrobiota
TAG
Leu
>WENV181072218
OEAN01000982
292636
Verrucomicrobiota
>WENV181072321
OEAN01001574
489412
Verrucomicrobiota
TCC
Gly
>WENV181072289
OEAN01001406
298263
Verrucomicrobiota
TTC
Glu
>WENV181072199
OEAN01000905
298263
Verrucomicrobiota
TTC
Glu
>WENV181072194
OEAN01000892
293069
Verrucomicrobiota
CTT
Lys
>WENV181072193
OEAN01000892
293069
Verrucomicrobiota
CTT
Lys
>WENV181072382
OEAN01002382
406336
Verrucomicrobiota
CCT
Arg
>WENV181072180
OEAN01000825
406369
Verrucomicrobiota
CCG
Arg
>WENV181071993
OEAN01000378
405940
Verrucomicrobiota
GGT
Thr
>WENV181072481
OEAN01003871
406044
Verrucomicrobiota
CTG
Gln
>WENV181072348
OEAN01001831
187556
Verrucomicrobiota
GGG
Pro
>WENV181072200
OEAN01000905
406037
Verrucomicrobiota
GTG
His
>WENV181072388
OEAN01002540
406360
Verrucomicrobiota
GAC
Val
>WENV181072248
OEAN01001118
187548
Verrucomicrobiota
TCT
Arg
>WENV181072192
OEAN01000892
406040
Verrucomicrobiota
CGT
Thr
>WENV181072150
OEAN01000723
57652
Verrucomicrobiota
TGA
Ser
>WENV181072178
OEAN01000818
406039
Verrucomicrobiota
CAC
Val
>WENV181072252
OEAN01001200
75458
Verrucomicrobiota
CAG
Leu
>WENV181072332
OEAN01001630
406368
Verrucomicrobiota
TTG
Gln
>WENV181072239
OEAN01001081
21159
Verrucomicrobiota
GGA
Ser
>WENV181072402
OEAN01002649
101461
Verrucomicrobiota
GTA
Tyr
>WENV181072163
OEAN01000752
293095
Verrucomicrobiota
TTT
Lys
>WENV181072231
OEAN01001040
187561
Verrucomicrobiota
CGG
Pro
>WENV181072149
OEAN01000723
406342
Verrucomicrobiota
CAT
Met
>WENV181072048
OEAN01000471
406351
Verrucomicrobiota
GTT
Asn
>WENV181071924
OEAN01000275
303305
Verrucomicrobiota
GGC
Ala
>WENV181072114
OEAN01000642
406346
Verrucomicrobiota
TAC
Val
>WENV181072219
OEAN01000982
8938
Verrucomicrobiota
GCT
Ser
>WENV181072184
OEAN01000834
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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