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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181108244
OEEI01164734
183770
Fusobacteriota
GAT
Ile
>WENV181107505
OEEI01009703
187804
Fusobacteriota
GTC
Asp
>WENV181107126
OEEI01002258
141145
Fusobacteriota
>WENV181107504
OEEI01009703
288879
Fusobacteriota
TAC
Val
>WENV181107359
OEEI01005799
119283
Fusobacteriota
GTA
Tyr
>WENV181107941
OEEI01039671
289706
Fusobacteriota
GTG
His
>WENV181107979
OEEI01047524
280538
Fusobacteriota
TTT
Lys
>WENV181108230
OEEI01155872
184485
Fusobacteriota
GTC
Asp
>WENV181108085
OEEI01082338
184485
Fusobacteriota
GTC
Asp
>WENV181107643
OEEI01015073
184485
Fusobacteriota
GTC
Asp
>WENV181107540
OEEI01010782
184485
Fusobacteriota
GTC
Asp
>WENV181107186
OEEI01002992
184485
Fusobacteriota
GTC
Asp
>WENV181107679
OEEI01016512
184487
Fusobacteriota
TCT
Arg
>WENV181107566
OEEI01011911
184487
Fusobacteriota
TCT
Arg
>WENV181107536
OEEI01010765
183767
Fusobacteriota
TGC
Ala
>WENV181108160
OEEI01107859
156979
Fusobacteriota
CAT
Met
>WENV181107980
OEEI01047524
143640
Fusobacteriota
TAG
Leu
>WENV181107994
OEEI01050400
196958
Fusobacteriota
GAT
Ile
>WENV181107896
OEEI01034465
196958
Fusobacteriota
GAT
Ile
>WENV181107678
OEEI01016512
289707
Fusobacteriota
TTT
Lys
>WENV181107648
OEEI01015194
289707
Fusobacteriota
TTT
Lys
>WENV181108026
OEEI01060854
292614
Fusobacteriota
TGC
Ala
>WENV181107995
OEEI01050400
292614
Fusobacteriota
TGC
Ala
>WENV181107897
OEEI01034465
292614
Fusobacteriota
TGC
Ala
>WENV181107942
OEEI01039951
288877
Fusobacteriota
GTT
Asn
>WENV181106867
OEEI01000509
288877
Fusobacteriota
GTT
Asn
>WENV181107231
OEEI01003614
288877
Fusobacteriota
GTT
Asn
>WENV181107565
OEEI01011911
292724
Fusobacteriota
TTT
Lys
>WENV181107528
OEEI01010434
292724
Fusobacteriota
TTT
Lys
>WENV181107358
OEEI01005799
407549
Fusobacteriota
TTC
Glu
>WENV181107945
OEEI01040317
214188
Fusobacteriota
CAT
Met
>WENV181108261
OEEI01173755
289739
Fusobacteriota
TAC
Val
>WENV181107642
OEEI01015073
289739
Fusobacteriota
TAC
Val
>WENV181107577
OEEI01012649
289739
Fusobacteriota
TAC
Val
>WENV181107547
OEEI01010886
289739
Fusobacteriota
TAC
Val
>WENV181107644
OEEI01015073
289708
Fusobacteriota
TGT
Thr
>WENV181107511
OEEI01009889
289708
Fusobacteriota
TGT
Thr
>WENV181107461
OEEI01008188
289708
Fusobacteriota
TGT
Thr
>WENV181108159
OEEI01107859
183769
Fusobacteriota
TCT
Arg
>WENV181107978
OEEI01047524
288876
Fusobacteriota
GTG
His
>WENV181106794
OEEI01000208
183773
Fusobacteriota
CCT
Arg
>WENV181106870
OEEI01000509
74687
Fusobacteriota
CAA
Leu
>WENV181106869
OEEI01000509
183772
Fusobacteriota
ACG
Arg
>WENV181107185
OEEI01002992
289709
Fusobacteriota
TAC
Val
>WENV181107150
OEEI01002535
202720
Fusobacteriota
TGG
Pro
>WENV181107976
OEEI01047524
202720
Fusobacteriota
TGG
Pro
>WENV181107944
OEEI01040317
57087
Fusobacteriota
TAA
Leu
>WENV181107537
OEEI01010765
192090
Fusobacteriota
CAT
Met
>WENV181107600
OEEI01013461
183766
Fusobacteriota
TGG
Pro
>WENV181108255
OEEI01168428
288880
Fusobacteriota
CTT
Lys
>WENV181107127
OEEI01002258
47168
Fusobacteriota
GCT
Ser
>WENV181107848
OEEI01027813
404073
Fusobacteriota
TTG
Gln
>WENV181107669
OEEI01016076
404073
Fusobacteriota
TTG
Gln
>WENV181107659
OEEI01015465
404073
Fusobacteriota
TTG
Gln
>WENV181106868
OEEI01000509
228619
Fusobacteriota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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