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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181119993
OEFJ01001429
288834
Bacillota
TAC
Val
>WENV181120092
OEFJ01005067
288834
Bacillota
TAC
Val
>WENV181119847
OEFJ01000203
283303
Bacillota
GTC
Asp
>WENV181119870
OEFJ01000283
283303
Bacillota
GTC
Asp
>WENV181120105
OEFJ01005067
283303
Bacillota
GTC
Asp
>WENV181119814
OEFJ01000132
482407
Bacillota
TCC
Gly
>WENV181120305
OEFJ01022059
289121
Bacillota
CCA
Trp
>WENV181119792
OEFJ01000098
408526
Bacillota
GCA
Cys
>WENV181119920
OEFJ01000536
296855
Bacillota
GGT
Thr
>WENV181120304
OEFJ01022059
287508
Bacillota
GTG
His
>WENV181119756
OEFJ01000057
48505
Bacillota
TGA
Ser
>WENV181120142
OEFJ01006835
284746
Bacillota
CTG
Gln
>WENV181120355
OEFJ01045175
20932
Bacillota
GCT
Ser
>WENV181120028
OEFJ01002330
283622
Bacillota
CTT
Lys
>WENV181120306
OEFJ01022128
295166
Bacillota
TGC
Ala
>WENV181120156
OEFJ01007938
100696
Bacillota
GTA
Tyr
>WENV181120157
OEFJ01007938
187458
Bacillota
CAT
Met
>WENV181119921
OEFJ01000536
184495
Bacillota
CAT
Met
>WENV181119788
OEFJ01000098
141202
Bacillota
CAA
Leu
>WENV181120192
OEFJ01009674
400041
Bacillota
CCG
Arg
>WENV181120076
OEFJ01004002
183957
Bacillota
CCT
Arg
>WENV181120148
OEFJ01007197
156730
Bacillota
ACG
Arg
>WENV181119917
OEFJ01000536
289713
Bacillota
TGT
Thr
>WENV181120127
OEFJ01006306
287380
Bacillota
CTT
Lys
>WENV181119971
OEFJ01001150
301649
Bacillota
TTT
Lys
>WENV181119996
OEFJ01001429
301649
Bacillota
TTT
Lys
>WENV181120094
OEFJ01005067
301649
Bacillota
TTT
Lys
>WENV181120214
OEFJ01010864
404126
Bacillota
GCC
Gly
>WENV181120204
OEFJ01010433
179935
Bacillota
GTC
Asp
>WENV181120098
OEFJ01005067
200200
Bacillota
ACG
Arg
>WENV181119833
OEFJ01000182
289761
Bacillota
TTT
Lys
>WENV181120179
OEFJ01009242
403759
Bacillota
CTC
Glu
>WENV181120178
OEFJ01009242
403759
Bacillota
CTC
Glu
>WENV181120205
OEFJ01010433
284742
Bacillota
GAA
Phe
>WENV181119835
OEFJ01000182
289715
Bacillota
TAC
Val
>WENV181119830
OEFJ01000182
289715
Bacillota
TAC
Val
>WENV181120409
OEFJ01076124
141141
Bacillota
GTA
Tyr
>WENV181120108
OEFJ01005067
141141
Bacillota
GTA
Tyr
>WENV181119994
OEFJ01001429
141141
Bacillota
GTA
Tyr
>WENV181119815
OEFJ01000132
184539
Bacillota
TCT
Arg
>WENV181120210
OEFJ01010433
100945
Bacillota
CAG
Leu
>WENV181120259
OEFJ01014651
289124
Bacillota
GTT
Asn
>WENV181120200
OEFJ01010101
178610
Bacillota
GTT
Asn
>WENV181119991
OEFJ01001429
178610
Bacillota
GTT
Asn
>WENV181119867
OEFJ01000283
178610
Bacillota
GTT
Asn
>WENV181119844
OEFJ01000203
178610
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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