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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181129024
OEFX01002385
118433
Bacteroidota
TAG
Leu
>WENV181129048
OEFX01002893
118433
Bacteroidota
TAG
Leu
>WENV181129003
OEFX01001841
400161
Bacteroidota
GGT
Thr
>WENV181128726
OEFX01000081
282852
Bacteroidota
TTT
Lys
>WENV181129757
OEFX01128609
402390
Bacteroidota
TTC
Glu
>WENV181129135
OEFX01005269
481329
Bacteroidota
>WENV181129155
OEFX01006211
400949
Bacteroidota
CCT
Arg
>WENV181128835
OEFX01000300
400949
Bacteroidota
CCT
Arg
>WENV181129481
OEFX01027938
178571
Bacteroidota
GTT
Asn
>WENV181129194
OEFX01007938
178571
Bacteroidota
GTT
Asn
>WENV181128808
OEFX01000256
178571
Bacteroidota
GTT
Asn
>WENV181129741
OEFX01114630
157895
Bacteroidota
TAC
Val
>WENV181129260
OEFX01011919
178572
Bacteroidota
CAT
Met
>WENV181129153
OEFX01006033
56385
Bacteroidota
TGA
Ser
>WENV181128878
OEFX01000416
56385
Bacteroidota
TGA
Ser
>WENV181129433
OEFX01022536
431429
Bacteroidota
CCT
Arg
>WENV181129004
OEFX01001841
312035
Bacteroidota
CCA
Trp
>WENV181128790
OEFX01000233
175944
Bacteroidota
CAT
Met
>WENV181129737
OEFX01112596
175886
Bacteroidota
GGC
Ala
>WENV181128900
OEFX01000568
283315
Bacteroidota
CGT
Thr
>WENV181128719
OEFX01000077
283315
Bacteroidota
CGT
Thr
>WENV181129534
OEFX01035897
400815
Bacteroidota
TTC
Glu
>WENV181129379
OEFX01018269
156128
Bacteroidota
GGG
Pro
>WENV181129129
OEFX01005098
20533
Bacteroidota
GGA
Ser
>WENV181129494
OEFX01030379
404109
Bacteroidota
CTC
Glu
>WENV181128838
OEFX01000305
404109
Bacteroidota
CTC
Glu
>WENV181128837
OEFX01000305
404109
Bacteroidota
CTC
Glu
>WENV181128764
OEFX01000159
156383
Bacteroidota
GGG
Pro
>WENV181128766
OEFX01000163
46648
Bacteroidota
TAA
Leu
>WENV181129044
OEFX01002810
46648
Bacteroidota
TAA
Leu
>WENV181129263
OEFX01012290
46648
Bacteroidota
TAA
Leu
>WENV181129686
OEFX01083907
118432
Bacteroidota
CAG
Leu
>WENV181129086
OEFX01003944
284236
Bacteroidota
CGG
Pro
>WENV181129016
OEFX01002309
284457
Bacteroidota
CAT
Met
>WENV181129167
OEFX01006517
284457
Bacteroidota
CAT
Met
>WENV181129212
OEFX01008791
284457
Bacteroidota
CAT
Met
>WENV181129078
OEFX01003606
187814
Bacteroidota
GTC
Asp
>WENV181129077
OEFX01003606
187814
Bacteroidota
GTC
Asp
>WENV181129392
OEFX01019075
178134
Bacteroidota
TGG
Pro
>WENV181128867
OEFX01000389
178134
Bacteroidota
TGG
Pro
>WENV181129770
OEFX01134391
118220
Bacteroidota
GTA
Tyr
>WENV181129002
OEFX01001841
118220
Bacteroidota
GTA
Tyr
>WENV181128925
OEFX01000783
118220
Bacteroidota
GTA
Tyr
>WENV181128935
OEFX01000892
179653
Bacteroidota
GTG
His
>WENV181129046
OEFX01002874
481328
Bacteroidota
TTG
Gln
>WENV181129754
OEFX01128083
498978
Bacteroidota
CCA
Trp
>WENV181129110
OEFX01004704
284456
Bacteroidota
CGG
Pro
>WENV181128717
OEFX01000074
284456
Bacteroidota
CGG
Pro
>WENV181129687
OEFX01083907
73509
Bacteroidota
GAG
Leu
>WENV181128901
OEFX01000568
481045
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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