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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181135010
OEGG01001469
282645
Betaproteobacteria
GCC
Gly
>WENV181135777
OEGG01153314
282645
Betaproteobacteria
GCC
Gly
>WENV181134951
OEGG01001009
280600
Betaproteobacteria
TGT
Thr
>WENV181135085
OEGG01002623
178858
Betaproteobacteria
CAT
Met
>WENV181134920
OEGG01000690
280601
Betaproteobacteria
TTG
Gln
>WENV181134972
OEGG01001170
77402
Betaproteobacteria
CAG
Leu
>WENV181134801
OEGG01000171
202951
Betaproteobacteria
GTC
Asp
>WENV181135008
OEGG01001465
118514
Betaproteobacteria
TAG
Leu
>WENV181135568
OEGG01041820
414048
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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