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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181173660
OEJK01004353
481233
Actinomycetota
CCC
Gly
>WENV181173661
OEJK01004445
482602
Actinomycetota
CCC
Gly
>WENV181173616
OEJK01000776
147829
Actinomycetota
TAA
Leu
>WENV181173674
OEJK01010487
295964
Actinomycetota
GTT
Asn
>WENV181173657
OEJK01003942
176075
Actinomycetota
TCT
Arg
>WENV181173642
OEJK01002386
176078
Actinomycetota
GGG
Pro
>WENV181173651
OEJK01002500
59689
Actinomycetota
GGA
Ser
>WENV181173675
OEJK01010524
175837
Actinomycetota
ACG
Arg
>WENV181173619
OEJK01000788
280549
Actinomycetota
CAC
Val
>WENV181173623
OEJK01000926
398948
Actinomycetota
TTC
Glu
>WENV181173665
OEJK01005769
117777
Actinomycetota
>WENV181173659
OEJK01004329
175949
Actinomycetota
CAT
Met
>WENV181173618
OEJK01000788
418252
Actinomycetota
GAC
Val
>WENV181173656
OEJK01003629
191955
Actinomycetota
TGT
Thr
>WENV181173634
OEJK01001086
280703
Actinomycetota
CCT
Arg
>WENV181173649
OEJK01002481
56451
Actinomycetota
CGA
Ser
>WENV181173641
OEJK01001886
99865
Actinomycetota
CAG
Leu
>WENV181173652
OEJK01002826
317680
Actinomycetota
CCG
Arg
>WENV181173622
OEJK01000911
430848
Actinomycetota
CTG
Gln
>WENV181173621
OEJK01000911
289788
Actinomycetota
CTC
Glu
>WENV181173662
OEJK01004880
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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