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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181203456
OERW01000060
295385
Bacteroidota
CCA
Trp
>WENV181203469
OERW01000099
117741
Bacteroidota
TAG
Leu
>WENV181203429
OERW01000016
398829
Bacteroidota
CCT
Arg
>WENV181203424
OERW01000014
175838
Bacteroidota
GTT
Asn
>WENV181203393
OERW01000001
289031
Bacteroidota
CAT
Met
>WENV181203488
OERW01000131
20206
Bacteroidota
GGA
Ser
>WENV181203435
OERW01000028
483416
Bacteroidota
CTG
Gln
>WENV181203483
OERW01000122
201819
Bacteroidota
CAT
Met
>WENV181203437
OERW01000033
175903
Bacteroidota
GTG
His
>WENV181203436
OERW01000030
351598
Bacteroidota
CGG
Pro
>WENV181203574
OERW01002653
182267
Bacteroidota
GTT
Asn
>WENV181203426
OERW01000014
56072
Bacteroidota
TAA
Leu
>WENV181203514
OERW01000311
57807
Bacteroidota
TGA
Ser
>WENV181203519
OERW01000460
175886
Bacteroidota
GGC
Ala
>WENV181203512
OERW01000275
175902
Bacteroidota
GGC
Ala
>WENV181203590
OERW01003768
179697
Bacteroidota
TGT
Thr
>WENV181203479
OERW01000111
280451
Bacteroidota
CGT
Thr
>WENV181203540
OERW01000907
418894
Bacteroidota
TTC
Glu
>WENV181203507
OERW01000201
99847
Bacteroidota
GTA
Tyr
>WENV181203454
OERW01000060
99847
Bacteroidota
GTA
Tyr
>WENV181203402
OERW01000004
186874
Bacteroidota
CAT
Met
>WENV181203442
OERW01000041
488746
Bacteroidota
CTG
Gln
>WENV181203452
OERW01000059
183889
Bacteroidota
GGC
Ala
>WENV181203459
OERW01000075
398828
Bacteroidota
CCG
Arg
>WENV181203458
OERW01000071
280446
Bacteroidota
TTT
Lys
>WENV181203423
OERW01000012
484496
Bacteroidota
TTG
Gln
>WENV181203727
OERW01022217
117804
Bacteroidota
TAG
Leu
>WENV181203503
OERW01000190
398836
Bacteroidota
GCA
Cys
>WENV181203493
OERW01000143
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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